Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:63891330-65054690

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48418 12 63927954 to 63931761 3807 + pseudogene predicted gene, 48418
Gm5653 12 63967728 to 63970749 3021 - pseudogene predicted gene 5653
Gm48421 12 64143748 to 64197261 53513 + lincRNA gene predicted gene, 48421
Gm48422 12 64147856 to 64152948 5092 - lincRNA gene predicted gene, 48422
Gm30915 12 64399733 to 64402137 2404 - lncRNA gene predicted gene, 30915
Fscb 12 64471330 to 64474690 3360 - protein coding gene fibrous sheath CABYR binding protein
Tssr116460 12 64474885 to 64474911 26 - TSS region transcription start site region 116460
Tssr3851 12 64474917 to 64474920 3 - TSS region transcription start site region 3851
Gm24066 12 64736402 to 64736532 130 + snoRNA gene predicted gene, 24066
Gm6395 12 64786311 to 64787001 690 + pseudogene predicted gene 6395
D12Dcr4 12 64814360 to 64814457 97 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 4
Gm4806 12 64816815 to 64818504 1689 + pseudogene predicted gene 4806
Rpl7a-ps1 12 64876836 to 64877628 792 - pseudogene ribosomal protein L7A, pseudogene 1
Cpgi4674 12 64917645 to 64918655 1010 CpG island CpG island 4674
Tssr113591 12 64917838 to 64917870 32 + TSS region transcription start site region 113591
Tssr113592 12 64917901 to 64917944 43 + TSS region transcription start site region 113592
Gm527 12 64917911 to 64924591 6680 + protein coding gene predicted gene 527
Tssr113593 12 64917945 to 64917989 44 + TSS region transcription start site region 113593
Tssr113594 12 64917991 to 64918001 10 + TSS region transcription start site region 113594
Klhl28 12 64941486 to 64965605 24119 - protein coding gene kelch-like 28
Tssr116461 12 64963364 to 64963374 10 - TSS region transcription start site region 116461
Cpgi4675 12 64965451 to 64966692 1241 CpG island CpG island 4675
Tssr116462 12 64965496 to 64965538 42 - TSS region transcription start site region 116462
Tssr113595 12 64965756 to 64965775 19 + TSS region transcription start site region 113595
Tssr113596 12 64965777 to 64965788 11 + TSS region transcription start site region 113596
Tssr113597 12 64965791 to 64965810 19 + TSS region transcription start site region 113597
Togaram1 12 64965804 to 65022573 56769 + protein coding gene TOG array regulator of axonemal microtubules 1
Tssr113598 12 64969301 to 64969308 7 + TSS region transcription start site region 113598
Gm48559 12 64980630 to 64982936 2306 - antisense lncRNA gene predicted gene, 48559
Tssr113599 12 65021819 to 65021835 16 + TSS region transcription start site region 113599
Cpgi4676 12 65036155 to 65036786 631 CpG island CpG island 4676
Tssr113600 12 65036319 to 65036358 39 + TSS region transcription start site region 113600
Prpf39 12 65036333 to 65063386 27053 + protein coding gene pre-mRNA processing factor 39
Tssr113601 12 65036827 to 65036833 6 + TSS region transcription start site region 113601
Tssr113602 12 65039732 to 65039742 10 + TSS region transcription start site region 113602
Tssr113603 12 65049188 to 65049198 10 + TSS region transcription start site region 113603