Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:61879868-65339974

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7753 12 61888923 to 61890604 1681 - pseudogene predicted gene 7753
Gm24750 12 61920574 to 61920677 103 + snRNA gene predicted gene, 24750
Gm48358 12 61990302 to 61991769 1467 - unclassified gene predicted gene, 48358
Gm2754 12 62065037 to 62065571 534 - pseudogene predicted gene 2754
Gm48359 12 62065564 to 62065697 133 + pseudogene predicted gene, 48359
Tssr113587 12 62065954 to 62065957 3 + TSS region transcription start site region 113587
Tssr3849 12 62066052 to 62066055 3 + TSS region transcription start site region 3849
Gm7754 12 62161956 to 62170242 8286 + pseudogene predicted gene 7754
Gm48365 12 62257849 to 62260583 2734 + pseudogene predicted gene, 48365
Gm6353 12 62365255 to 62366305 1050 + pseudogene predicted gene 6353
Gm48366 12 62372197 to 62375371 3174 - pseudogene predicted gene, 48366
Gm48367 12 62463949 to 62464279 330 - pseudogene predicted gene, 48367
Gm48368 12 62535346 to 62537149 1803 + pseudogene predicted gene, 48368
Gm24590 12 62598892 to 62599010 118 - miRNA gene predicted gene, 24590
Tssr113588 12 62687769 to 62687772 3 + TSS region transcription start site region 113588
Tssr113589 12 62687786 to 62687814 28 + TSS region transcription start site region 113589
Spanxn4 12 62687822 to 62688245 423 + protein coding gene SPANX family, member N4
Gm19134 12 62690053 to 62690539 486 - pseudogene predicted gene, 19134
Tspyl-ps 12 62703160 to 62704276 1116 - pseudogene testis-specific protein, Y-encoded-like, pseudogene
Tssr113590 12 62718741 to 62718746 5 + TSS region transcription start site region 113590
Gm48378 12 62853799 to 62854063 264 - pseudogene predicted gene, 48378
Gm7763 12 62882277 to 62883282 1005 - pseudogene predicted gene 7763
Gm5185 12 63072526 to 63073144 618 - pseudogene predicted gene 5185
Gm48415 12 63170181 to 63171903 1722 + pseudogene predicted gene, 48415
Gm48416 12 63355784 to 63357904 2120 + pseudogene predicted gene, 48416
Tssr3850 12 63387700 to 63387710 10 + TSS region transcription start site region 3850
D12Ertd216e 12 63562870 to 63563117 247 DNA segment DNA segment, Chr 12, ERATO Doi 216, expressed
Gm48417 12 63571863 to 63575707 3844 + pseudogene predicted gene, 48417
Gm24921 12 63609868 to 63609974 106 + snRNA gene predicted gene, 24921
Gm48418 12 63927954 to 63931761 3807 + pseudogene predicted gene, 48418
Gm5653 12 63967728 to 63970749 3021 - pseudogene predicted gene 5653
Gm48421 12 64143748 to 64197261 53513 + lincRNA gene predicted gene, 48421
Gm48422 12 64147856 to 64152948 5092 - lincRNA gene predicted gene, 48422
Gm30915 12 64399733 to 64402137 2404 - lncRNA gene predicted gene, 30915
Fscb 12 64471330 to 64474690 3360 - protein coding gene fibrous sheath CABYR binding protein
Tssr116460 12 64474885 to 64474911 26 - TSS region transcription start site region 116460
Tssr3851 12 64474917 to 64474920 3 - TSS region transcription start site region 3851
Gm24066 12 64736402 to 64736532 130 + snoRNA gene predicted gene, 24066
Gm6395 12 64786311 to 64787001 690 + pseudogene predicted gene 6395
D12Dcr4 12 64814360 to 64814457 97 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 4
Gm4806 12 64816815 to 64818504 1689 + pseudogene predicted gene 4806
Rpl7a-ps1 12 64876836 to 64877628 792 - pseudogene ribosomal protein L7A, pseudogene 1
Cpgi4674 12 64917645 to 64918655 1010 CpG island CpG island 4674
Tssr113591 12 64917838 to 64917870 32 + TSS region transcription start site region 113591
Tssr113592 12 64917901 to 64917944 43 + TSS region transcription start site region 113592
Gm527 12 64917911 to 64924591 6680 + protein coding gene predicted gene 527
Tssr113593 12 64917945 to 64917989 44 + TSS region transcription start site region 113593
Tssr113594 12 64917991 to 64918001 10 + TSS region transcription start site region 113594
Klhl28 12 64941486 to 64965605 24119 - protein coding gene kelch-like 28
Tssr116461 12 64963364 to 64963374 10 - TSS region transcription start site region 116461
Cpgi4675 12 64965451 to 64966692 1241 CpG island CpG island 4675
Tssr116462 12 64965496 to 64965538 42 - TSS region transcription start site region 116462
Tssr113595 12 64965756 to 64965775 19 + TSS region transcription start site region 113595
Tssr113596 12 64965777 to 64965788 11 + TSS region transcription start site region 113596
Tssr113597 12 64965791 to 64965810 19 + TSS region transcription start site region 113597
Togaram1 12 64965804 to 65022573 56769 + protein coding gene TOG array regulator of axonemal microtubules 1
Tssr113598 12 64969301 to 64969308 7 + TSS region transcription start site region 113598
Gm48559 12 64980630 to 64982936 2306 - antisense lncRNA gene predicted gene, 48559
Tssr113599 12 65021819 to 65021835 16 + TSS region transcription start site region 113599
Cpgi4676 12 65036155 to 65036786 631 CpG island CpG island 4676
Tssr113600 12 65036319 to 65036358 39 + TSS region transcription start site region 113600
Prpf39 12 65036333 to 65063386 27053 + protein coding gene pre-mRNA processing factor 39
Tssr113601 12 65036827 to 65036833 6 + TSS region transcription start site region 113601
Tssr113602 12 65039732 to 65039742 10 + TSS region transcription start site region 113602
Tssr113603 12 65049188 to 65049198 10 + TSS region transcription start site region 113603
Gm25970 12 65056573 to 65056658 85 + snoRNA gene predicted gene, 25970
Tssr113604 12 65061731 to 65061734 3 + TSS region transcription start site region 113604
Fkbp3 12 65062432 to 65073938 11506 - protein coding gene FK506 binding protein 3
Tssr116463 12 65066667 to 65066716 49 - TSS region transcription start site region 116463
Tssr116464 12 65071099 to 65071102 3 - TSS region transcription start site region 116464
Cpgi4677 12 65073353 to 65074339 986 CpG island CpG island 4677
Tssr116465 12 65073927 to 65073954 27 - TSS region transcription start site region 116465
Gm47870 12 65074990 to 65076315 1325 - unclassified gene predicted gene, 47870
Cpgi4678 12 65075345 to 65076177 832 CpG island CpG island 4678
Tssr113605 12 65075582 to 65075617 35 + TSS region transcription start site region 113605
Fancm 12 65075603 to 65132058 56455 + protein coding gene Fanconi anemia, complementation group M
Gm47869 12 65099844 to 65100006 162 - pseudogene predicted gene, 47869
Tssr113606 12 65113089 to 65113104 15 + TSS region transcription start site region 113606
Mis18bp1 12 65132734 to 65172580 39846 - protein coding gene MIS18 binding protein 1
Tssr116466 12 65159203 to 65159205 2 - TSS region transcription start site region 116466
Cpgi4679 12 65172218 to 65172955 737 CpG island CpG island 4679
Tssr116467 12 65172541 to 65172552 11 - TSS region transcription start site region 116467
Tssr116468 12 65172560 to 65172618 58 - TSS region transcription start site region 116468
4930471E15Rik 12 65182380 to 65186387 4007 + lincRNA gene RIKEN cDNA 4930471E15 gene
Tssr113607 12 65182562 to 65182572 10 + TSS region transcription start site region 113607
Gm31063 12 65190613 to 65202551 11938 - lincRNA gene predicted gene, 31063
Tssr116469 12 65213506 to 65213514 8 - TSS region transcription start site region 116469
Tssr113608 12 65225483 to 65225494 11 + TSS region transcription start site region 113608
Tssr113609 12 65225513 to 65225544 31 + TSS region transcription start site region 113609
Wdr20rt 12 65225517 to 65228454 2937 + protein coding gene WD repeat domain 20, retrogene
Cpgi4680 12 65225646 to 65226230 584 CpG island CpG island 4680
Tssr113610 12 65225723 to 65225744 21 + TSS region transcription start site region 113610
Tssr113611 12 65225747 to 65225757 10 + TSS region transcription start site region 113611
Cpgi4681 12 65226825 to 65227000 175 CpG island CpG island 4681
Gm47973 12 65251710 to 65251908 198 + pseudogene predicted gene, 47973