Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:61453860-61593880

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nanog-ps2 12 61458510 to 61459038 528 + pseudogene Nanog pseudogene 2
Gm20063 12 61499660 to 61521820 22160 - lincRNA gene predicted gene, 20063
Cpgi4671 12 61521610 to 61521887 277 CpG island CpG island 4671
Tssr116459 12 61521805 to 61521818 13 - TSS region transcription start site region 116459
Lrfn5 12 61522814 to 61857928 335114 + protein coding gene leucine rich repeat and fibronectin type III domain containing 5
Cpgi4672 12 61522845 to 61523563 718 CpG island CpG island 4672
Tssr113573 12 61523112 to 61523184 72 + TSS region transcription start site region 113573
Tssr113574 12 61523860 to 61523880 20 + TSS region transcription start site region 113574
Tssr113575 12 61523889 to 61523922 33 + TSS region transcription start site region 113575
Cpgi4673 12 61524341 to 61524788 447 CpG island CpG island 4673
Tssr113576 12 61524536 to 61524554 18 + TSS region transcription start site region 113576
Tssr113577 12 61524600 to 61524640 40 + TSS region transcription start site region 113577
Tssr113578 12 61528678 to 61528683 5 + TSS region transcription start site region 113578
Tssr113579 12 61534223 to 61534226 3 + TSS region transcription start site region 113579
Tssr113580 12 61571441 to 61571444 3 + TSS region transcription start site region 113580
Gm30738 12 61579674 to 61580175 501 + pseudogene predicted gene, 30738
Tssr113581 12 61586187 to 61586204 17 + TSS region transcription start site region 113581