Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:59073058-59973182

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pnn 12 59066919 to 59074017 7098 + protein coding gene pinin
Tssr113556 12 59080988 to 59080993 5 + TSS region transcription start site region 113556
Gm5786 12 59081019 to 59081900 881 + pseudogene predicted pseudogene 5786
Rpl21-ps3 12 59094055 to 59094537 482 - pseudogene ribosomal protein L21, pseudogene 3
Tssr113557 12 59095571 to 59095633 62 + TSS region transcription start site region 113557
Tssr113558 12 59095653 to 59095658 5 + TSS region transcription start site region 113558
Mia2 12 59095800 to 59109130 13330 + protein coding gene MIA SH3 domain ER export factor 2
Tssr113559 12 59129734 to 59129755 21 + TSS region transcription start site region 113559
Tssr113560 12 59129757 to 59129818 61 + TSS region transcription start site region 113560
Tssr113561 12 59130016 to 59130028 12 + TSS region transcription start site region 113561
Cpgi4668 12 59130763 to 59131866 1103 CpG island CpG island 4668
Tssr113562 12 59130767 to 59130786 19 + TSS region transcription start site region 113562
Tssr113563 12 59130994 to 59131029 35 + TSS region transcription start site region 113563
Tssr116455 12 59131278 to 59131294 16 - TSS region transcription start site region 116455
Tssr113564 12 59131425 to 59131469 44 + TSS region transcription start site region 113564
Tssr113565 12 59131473 to 59131495 22 + TSS region transcription start site region 113565
Tssr113566 12 59133799 to 59133816 17 + TSS region transcription start site region 113566
Tssr113567 12 59133827 to 59133839 12 + TSS region transcription start site region 113567
Gm24233 12 59134072 to 59134193 121 + snoRNA gene predicted gene, 24233
Tssr113568 12 59140452 to 59140459 7 + TSS region transcription start site region 113568
Tssr113569 12 59153077 to 59153081 4 + TSS region transcription start site region 113569
Tssr113570 12 59158277 to 59158299 22 + TSS region transcription start site region 113570
Tssr113571 12 59188444 to 59188459 15 + TSS region transcription start site region 113571
Fbxo33 12 59200655 to 59219725 19070 - protein coding gene F-box protein 33
Cpgi4669 12 59218655 to 59220254 1599 CpG island CpG island 4669
Tssr116456 12 59219446 to 59219494 48 - TSS region transcription start site region 116456
Tssr116457 12 59219701 to 59219717 16 - TSS region transcription start site region 116457
Tssr116458 12 59219729 to 59219776 47 - TSS region transcription start site region 116458
Gm27284 12 59237107 to 59237176 69 - miRNA gene predicted gene, 27284
Gm48258 12 59262673 to 59262984 311 + pseudogene predicted gene, 48258
Gm7719 12 59291964 to 59292938 974 + pseudogene predicted gene 7719
Gm4930 12 59317083 to 59318169 1086 - pseudogene predicted gene 4930
D12Mit173 12 59324964 to 59325085 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 173
Gm48263 12 59336828 to 59337011 183 + pseudogene predicted gene, 48263
Gm18242 12 59350976 to 59351517 541 - pseudogene predicted gene, 18242
Gm48268 12 59354819 to 59355609 790 - pseudogene predicted gene, 48268
Cpgi4670 12 59477796 to 59478026 230 CpG island CpG island 4670
D12Mit89 12 59523058 to 59523182 124 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 89
Gm7727 12 59645496 to 59646166 670 - pseudogene predicted gene 7727
Gm40430 12 59659997 to 59684204 24207 + lncRNA gene predicted gene, 40430
Gm24377 12 59665654 to 59665784 130 - snoRNA gene predicted gene, 24377
Gm22673 12 59672990 to 59673120 130 + snoRNA gene predicted gene, 22673
Gm48285 12 59718310 to 59720329 2019 - unclassified gene predicted gene, 48285
D12Mit190 12 59728466 to 59728592 126 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 190
D12Dcr3 12 59814480 to 59814575 95 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 3