Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:57544113-57757928

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxa1 12 57540628 to 57546916 6288 - protein coding gene forkhead box A1
Tssr116426 12 57544109 to 57544126 17 - TSS region transcription start site region 116426
Cpgi4654 12 57545119 to 57546915 1796 CpG island CpG island 4654
Tssr116427 12 57545987 to 57546016 29 - TSS region transcription start site region 116427
Tssr116428 12 57546127 to 57546141 14 - TSS region transcription start site region 116428
Tssr116429 12 57546149 to 57546158 9 - TSS region transcription start site region 116429
Tssr116430 12 57546465 to 57546504 39 - TSS region transcription start site region 116430
Tssr116431 12 57546693 to 57546706 13 - TSS region transcription start site region 116431
Tssr116432 12 57546781 to 57546793 12 - TSS region transcription start site region 116432
Tssr116433 12 57546877 to 57546923 46 - TSS region transcription start site region 116433
Cpgi4655 12 57548528 to 57548795 267 CpG island CpG island 4655
Cpgi4656 12 57550081 to 57550611 530 CpG island CpG island 4656
Tssr113528 12 57564097 to 57564105 8 + TSS region transcription start site region 113528
Tssr113529 12 57564111 to 57564150 39 + TSS region transcription start site region 113529
Ttc6 12 57564113 to 57737928 173815 + protein coding gene tetratricopeptide repeat domain 6
Gm30518 12 57571258 to 57575851 4593 - lncRNA gene predicted gene, 30518
Cpgi4657 12 57575832 to 57576874 1042 CpG island CpG island 4657
Tssr113530 12 57576140 to 57576166 26 + TSS region transcription start site region 113530
4921518K17Rik 12 57585975 to 57618602 32627 - antisense lncRNA gene RIKEN cDNA 4921518K17 gene
Rpl26-ps2 12 57632581 to 57633015 434 - pseudogene ribosomal protein L26, pseudogene 2
BC042761 12 57661458 to 57662911 1453 - antisense lncRNA gene cDNA sequence BC042761
Gm47617 12 57698601 to 57699062 461 - pseudogene predicted gene, 47617