Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:56462550-56532560

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4632 12 56464293 to 56464575 282 CpG island CpG island 4632
Sfta3-ps 12 56490428 to 56529420 38992 - lncRNA gene surfactant associated 3, pseudogene
Tssr116369 12 56497397 to 56497430 33 - TSS region transcription start site region 116369
Tssr116370 12 56497550 to 56497560 10 - TSS region transcription start site region 116370
Tssr116371 12 56497729 to 56497733 4 - TSS region transcription start site region 116371
Gm47720 12 56498688 to 56500828 2140 - unclassified gene predicted gene, 47720
Tssr116372 12 56513936 to 56513968 32 - TSS region transcription start site region 116372
Cpgi4633 12 56519635 to 56520191 556 CpG island CpG island 4633
Cpgi4634 12 56520916 to 56521393 477 CpG island CpG island 4634
Tssr116373 12 56521340 to 56521351 11 - TSS region transcription start site region 116373
Tssr116374 12 56521388 to 56521397 9 - TSS region transcription start site region 116374
Tssr116375 12 56522185 to 56522198 13 - TSS region transcription start site region 116375
Tssr116376 12 56523254 to 56523266 12 - TSS region transcription start site region 116376
Cpgi4635 12 56528962 to 56529364 402 CpG island CpG island 4635
Tssr116377 12 56529377 to 56529386 9 - TSS region transcription start site region 116377
Tssr116378 12 56529396 to 56529397 1 - TSS region transcription start site region 116378
Tssr116379 12 56529410 to 56529437 27 - TSS region transcription start site region 116379
Tssr116380 12 56529446 to 56529451 5 - TSS region transcription start site region 116380
Tssr116381 12 56529456 to 56529463 7 - TSS region transcription start site region 116381
Tssr3847 12 56529491 to 56529498 7 - TSS region transcription start site region 3847
Tssr116382 12 56529500 to 56529511 11 - TSS region transcription start site region 116382
Tssr116383 12 56529548 to 56529558 10 - TSS region transcription start site region 116383
Nkx2-1 12 56531958 to 56536908 4950 - protein coding gene NK2 homeobox 1