Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:5635532-10385550

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351 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32398 12 5603742 to 5685123 81381 + lncRNA gene predicted gene, 32398
Gm40238 12 5640573 to 5643377 2804 + pseudogene predicted gene, 40238
Tssr112597 12 5642998 to 5643001 3 + TSS region transcription start site region 112597
Tssr112598 12 5643047 to 5643071 24 + TSS region transcription start site region 112598
Tssr112599 12 5643128 to 5643153 25 + TSS region transcription start site region 112599
Gm9548 12 5740550 to 5985540 244990 + lncRNA gene predicted gene 9548
Gm32442 12 5807271 to 5856147 48876 + lincRNA gene predicted gene, 32442
Tssr112600 12 5808193 to 5808200 7 + TSS region transcription start site region 112600
Tssr112601 12 5808264 to 5808304 40 + TSS region transcription start site region 112601
Gm23752 12 5843712 to 5843826 114 + rRNA gene predicted gene, 23752
Gm46333 12 5847755 to 5849569 1814 + lncRNA gene predicted gene, 46333
Tssr3770 12 5892048 to 5892067 19 + TSS region transcription start site region 3770
Tssr3771 12 5892069 to 5892084 15 + TSS region transcription start site region 3771
Tssr112602 12 5896588 to 5896593 5 + TSS region transcription start site region 112602
4930404K06Rik 12 5927027 to 5943631 16604 unclassified gene RIKEN cDNA 4930404K06 gene
Tssr115684 12 5943595 to 5943621 26 - TSS region transcription start site region 115684
D12Mit103 12 5956981 to 5957112 131 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 103
D12Mit1009 12 5956997 to 5957131 134 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 1009
Gm48608 12 6005667 to 6006240 573 + pseudogene predicted gene, 48608
Tssr112603 12 6005798 to 6005799 1 + TSS region transcription start site region 112603
Tssr3772 12 6022656 to 6022659 3 + TSS region transcription start site region 3772
Gm32576 12 6037892 to 6095802 57910 + lncRNA gene predicted gene, 32576
Tssr112604 12 6126342 to 6126345 3 + TSS region transcription start site region 112604
Gm32631 12 6133832 to 6137024 3192 + lncRNA gene predicted gene, 32631
Gm4927 12 6281019 to 6282336 1317 - pseudogene predicted gene 4927
Gm3678 12 6498163 to 6498606 443 - pseudogene predicted gene 3678
Tssr3773 12 6595843 to 6595851 8 + TSS region transcription start site region 3773
Gm48619 12 6699753 to 6803300 103547 + lincRNA gene predicted gene, 48619
Tssr3774 12 6748477 to 6748499 22 + TSS region transcription start site region 3774
Gm46311 12 6966758 to 6966960 202 - pseudogene predicted gene, 46311
D12Mit197 12 7242998 to 7243119 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 197
Gm32773 12 7289086 to 7298731 9645 - lncRNA gene predicted gene, 32773
Tssr3775 12 7351879 to 7351882 3 + TSS region transcription start site region 3775
1700101O22Rik 12 7372039 to 7380330 8291 - lincRNA gene RIKEN cDNA 1700101O22 gene
Tssr112605 12 7379886 to 7379909 23 + TSS region transcription start site region 112605
Tssr115685 12 7380308 to 7380321 13 - TSS region transcription start site region 115685
Tssr115686 12 7380324 to 7380361 37 - TSS region transcription start site region 115686
Tssr115687 12 7380374 to 7380377 3 - TSS region transcription start site region 115687
Tssr115688 12 7381565 to 7381570 5 - TSS region transcription start site region 115688
Gm9139 12 7417425 to 7418124 699 - pseudogene predicted gene 9139
Tssr115689 12 7555365 to 7555366 1 - TSS region transcription start site region 115689
Tssr112606 12 7597934 to 7597935 1 + TSS region transcription start site region 112606
D12Mit215 12 7612573 to 7612697 124 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 215
Bmd12 12 7612573 to 7612697 124 QTL bone mineral density 12
Vtbt12 12 7612573 to 7612697 124 QTL vertebral trabecular bone trait 12
Tssr115690 12 7681638 to 7681641 3 - TSS region transcription start site region 115690
Gm32828 12 7754915 to 7859630 104715 - lincRNA gene predicted gene, 32828
Tssr3776 12 7854079 to 7854081 2 - TSS region transcription start site region 3776
Gm9144 12 7859900 to 7860907 1007 + pseudogene predicted gene 9144
Tssr115691 12 7876428 to 7876435 7 - TSS region transcription start site region 115691
Gm18337 12 7880510 to 7883870 3360 - pseudogene predicted gene, 18337
Gm18387 12 7897573 to 7898274 701 + pseudogene predicted gene, 18387
Tssr115692 12 7901606 to 7901616 10 - TSS region transcription start site region 115692
Tssr115693 12 7901637 to 7901652 15 - TSS region transcription start site region 115693
Tssr115694 12 7901656 to 7901665 9 - TSS region transcription start site region 115694
Gm48633 12 7911889 to 7950061 38172 - lincRNA gene predicted gene, 48633
Tssr115695 12 7950055 to 7950089 34 - TSS region transcription start site region 115695
Tssr115696 12 7950123 to 7950146 23 - TSS region transcription start site region 115696
Tssr115697 12 7950147 to 7950169 22 - TSS region transcription start site region 115697
Tssr112607 12 7977640 to 7977654 14 + TSS region transcription start site region 112607
Apob 12 7977648 to 8016835 39187 + protein coding gene apolipoprotein B
Tssr3777 12 7977689 to 7977703 14 + TSS region transcription start site region 3777
Tssr3778 12 7977730 to 7977741 11 + TSS region transcription start site region 3778
Tssr112608 12 7977750 to 7977755 5 + TSS region transcription start site region 112608
Tssr3779 12 7977767 to 7977792 25 + TSS region transcription start site region 3779
Tssr115698 12 7979296 to 7979320 24 - TSS region transcription start site region 115698
Tssr115699 12 7979371 to 7979378 7 - TSS region transcription start site region 115699
Tssr112609 12 7980499 to 7980535 36 + TSS region transcription start site region 112609
Tssr112610 12 7980560 to 7980576 16 + TSS region transcription start site region 112610
Tssr112611 12 7980582 to 7980599 17 + TSS region transcription start site region 112611
Tssr112612 12 7983027 to 7983038 11 + TSS region transcription start site region 112612
Tssr112613 12 7983114 to 7983128 14 + TSS region transcription start site region 112613
Tssr112614 12 7983914 to 7983934 20 + TSS region transcription start site region 112614
Tssr112615 12 7985278 to 7985302 24 + TSS region transcription start site region 112615
Tssr112616 12 7985342 to 7985373 31 + TSS region transcription start site region 112616
Tssr112617 12 7987740 to 7987782 42 + TSS region transcription start site region 112617
Tssr112618 12 7987789 to 7987800 11 + TSS region transcription start site region 112618
Tssr112619 12 7988666 to 7988681 15 + TSS region transcription start site region 112619
Tssr3780 12 7988708 to 7988724 16 + TSS region transcription start site region 3780
Tssr112620 12 7988749 to 7988769 20 + TSS region transcription start site region 112620
Tssr112621 12 7992938 to 7992949 11 + TSS region transcription start site region 112621
Tssr3781 12 7995672 to 7995675 3 + TSS region transcription start site region 3781
Tssr112622 12 7996509 to 7996521 12 + TSS region transcription start site region 112622
Tssr112623 12 7998609 to 7998630 21 + TSS region transcription start site region 112623
Tssr112624 12 8001833 to 8001853 20 + TSS region transcription start site region 112624
Tssr112625 12 8003284 to 8003307 23 + TSS region transcription start site region 112625
Tssr112626 12 8004906 to 8004918 12 + TSS region transcription start site region 112626
Tssr112627 12 8004977 to 8004988 11 + TSS region transcription start site region 112627
Tssr112628 12 8006081 to 8006091 10 + TSS region transcription start site region 112628
Tssr112629 12 8006245 to 8006252 7 + TSS region transcription start site region 112629
Tssr112630 12 8006384 to 8006392 8 + TSS region transcription start site region 112630
Tssr112631 12 8006617 to 8006629 12 + TSS region transcription start site region 112631
Tssr112632 12 8006651 to 8006660 9 + TSS region transcription start site region 112632
Tssr112633 12 8006716 to 8006736 20 + TSS region transcription start site region 112633
Tssr112634 12 8006867 to 8006881 14 + TSS region transcription start site region 112634
Tssr112635 12 8006958 to 8006967 9 + TSS region transcription start site region 112635
Tssr112636 12 8007429 to 8007432 3 + TSS region transcription start site region 112636
Tssr112637 12 8007502 to 8007512 10 + TSS region transcription start site region 112637
Tssr112638 12 8007574 to 8007577 3 + TSS region transcription start site region 112638
Tssr112639 12 8007801 to 8007819 18 + TSS region transcription start site region 112639
Tssr112640 12 8007854 to 8007861 7 + TSS region transcription start site region 112640
Tssr112641 12 8007908 to 8007913 5 + TSS region transcription start site region 112641
Tssr112642 12 8007960 to 8007987 27 + TSS region transcription start site region 112642
Tssr112643 12 8008067 to 8008076 9 + TSS region transcription start site region 112643
Tssr112644 12 8008280 to 8008290 10 + TSS region transcription start site region 112644
Tssr112645 12 8008382 to 8008392 10 + TSS region transcription start site region 112645
Tssr112646 12 8008408 to 8008421 13 + TSS region transcription start site region 112646
Tssr112647 12 8008582 to 8008593 11 + TSS region transcription start site region 112647
Tssr112648 12 8008594 to 8008615 21 + TSS region transcription start site region 112648
Tssr3782 12 8008696 to 8008712 16 + TSS region transcription start site region 3782
Tssr112649 12 8009086 to 8009097 11 + TSS region transcription start site region 112649
Tssr112650 12 8009145 to 8009177 32 + TSS region transcription start site region 112650
Tssr112651 12 8009216 to 8009229 13 + TSS region transcription start site region 112651
Tssr112652 12 8009240 to 8009259 19 + TSS region transcription start site region 112652
Tssr112653 12 8009267 to 8009278 11 + TSS region transcription start site region 112653
Tssr112654 12 8009283 to 8009292 9 + TSS region transcription start site region 112654
Tssr112655 12 8009301 to 8009315 14 + TSS region transcription start site region 112655
Tssr112656 12 8009323 to 8009335 12 + TSS region transcription start site region 112656
Tssr112657 12 8009338 to 8009349 11 + TSS region transcription start site region 112657
Tssr112658 12 8009371 to 8009382 11 + TSS region transcription start site region 112658
Tssr112659 12 8009424 to 8009461 37 + TSS region transcription start site region 112659
Tssr112660 12 8009576 to 8009585 9 + TSS region transcription start site region 112660
Tssr112661 12 8009807 to 8009820 13 + TSS region transcription start site region 112661
Tssr112662 12 8010051 to 8010061 10 + TSS region transcription start site region 112662
Tssr112663 12 8010286 to 8010302 16 + TSS region transcription start site region 112663
Tssr112664 12 8010311 to 8010326 15 + TSS region transcription start site region 112664
Tssr112665 12 8010476 to 8010481 5 + TSS region transcription start site region 112665
Tssr112666 12 8010485 to 8010501 16 + TSS region transcription start site region 112666
Tssr112667 12 8010532 to 8010550 18 + TSS region transcription start site region 112667
Tssr112668 12 8010670 to 8010686 16 + TSS region transcription start site region 112668
Tssr112669 12 8010755 to 8010773 18 + TSS region transcription start site region 112669
Tssr112670 12 8010808 to 8010829 21 + TSS region transcription start site region 112670
Tssr112671 12 8010923 to 8010932 9 + TSS region transcription start site region 112671
Tssr112672 12 8011502 to 8011514 12 + TSS region transcription start site region 112672
Tssr112673 12 8011545 to 8011582 37 + TSS region transcription start site region 112673
Tssr112674 12 8011646 to 8011657 11 + TSS region transcription start site region 112674
Tssr112675 12 8011673 to 8011689 16 + TSS region transcription start site region 112675
Tssr112676 12 8011776 to 8011785 9 + TSS region transcription start site region 112676
Tssr112677 12 8011926 to 8011937 11 + TSS region transcription start site region 112677
Tssr112678 12 8012050 to 8012059 9 + TSS region transcription start site region 112678
Tssr112679 12 8012075 to 8012085 10 + TSS region transcription start site region 112679
Tssr112680 12 8012094 to 8012101 7 + TSS region transcription start site region 112680
Tssr112681 12 8012141 to 8012151 10 + TSS region transcription start site region 112681
Tssr112682 12 8012154 to 8012166 12 + TSS region transcription start site region 112682
Tssr112683 12 8012191 to 8012200 9 + TSS region transcription start site region 112683
Tssr112684 12 8012235 to 8012244 9 + TSS region transcription start site region 112684
Tssr112685 12 8012283 to 8012307 24 + TSS region transcription start site region 112685
Tssr112686 12 8012331 to 8012338 7 + TSS region transcription start site region 112686
Tssr112687 12 8012411 to 8012419 8 + TSS region transcription start site region 112687
Tssr112688 12 8012512 to 8012522 10 + TSS region transcription start site region 112688
Tssr112689 12 8012554 to 8012562 8 + TSS region transcription start site region 112689
Tssr112690 12 8012579 to 8012588 9 + TSS region transcription start site region 112690
Tssr112691 12 8012630 to 8012644 14 + TSS region transcription start site region 112691
Tssr112692 12 8012666 to 8012677 11 + TSS region transcription start site region 112692
Tssr112693 12 8012685 to 8012696 11 + TSS region transcription start site region 112693
Tssr112694 12 8012823 to 8012832 9 + TSS region transcription start site region 112694
Tssr112695 12 8013042 to 8013049 7 + TSS region transcription start site region 112695
Tssr112696 12 8015037 to 8015050 13 + TSS region transcription start site region 112696
Tssr112697 12 8015320 to 8015334 14 + TSS region transcription start site region 112697
Tssr112698 12 8015367 to 8015386 19 + TSS region transcription start site region 112698
Tssr112699 12 8015468 to 8015496 28 + TSS region transcription start site region 112699
Tssr112700 12 8015500 to 8015513 13 + TSS region transcription start site region 112700
Tssr3783 12 8015647 to 8015656 9 + TSS region transcription start site region 3783
Tssr112701 12 8015691 to 8015703 12 + TSS region transcription start site region 112701
Tssr112702 12 8015814 to 8015826 12 + TSS region transcription start site region 112702
Tssr112703 12 8015955 to 8015970 15 + TSS region transcription start site region 112703
Tssr112704 12 8016805 to 8016811 6 + TSS region transcription start site region 112704
Gm33037 12 8042932 to 8208096 165164 - antisense lncRNA gene predicted gene, 33037
Cpgi4390 12 8207975 to 8208490 515 CpG island CpG island 4390
Ldah 12 8208107 to 8285759 77652 + protein coding gene lipid droplet associated hydrolase
Tssr112705 12 8208119 to 8208161 42 + TSS region transcription start site region 112705
Tssr112706 12 8208164 to 8208172 8 + TSS region transcription start site region 112706
Tssr112707 12 8216602 to 8216609 7 + TSS region transcription start site region 112707
Tssr112708 12 8216612 to 8216619 7 + TSS region transcription start site region 112708
Tssr112709 12 8216636 to 8216666 30 + TSS region transcription start site region 112709
Tssr112710 12 8216670 to 8216684 14 + TSS region transcription start site region 112710
Tssr112711 12 8220003 to 8220011 8 + TSS region transcription start site region 112711
Tssr112712 12 8220026 to 8220033 7 + TSS region transcription start site region 112712
Tssr112713 12 8287053 to 8287058 5 + TSS region transcription start site region 112713
Gm48898 12 8291024 to 8293694 2670 - lincRNA gene predicted gene, 48898
Cpgi4391 12 8297623 to 8299303 1680 CpG island CpG island 4391
Gdf7 12 8297918 to 8301954 4036 - protein coding gene growth differentiation factor 7
Cpgi4392 12 8299540 to 8299794 254 CpG island CpG island 4392
Cpgi4393 12 8301312 to 8302537 1225 CpG island CpG island 4393
Tssr115700 12 8301981 to 8301995 14 - TSS region transcription start site region 115700
Tssr115701 12 8302006 to 8302018 12 - TSS region transcription start site region 115701
Cpgi4394 12 8313150 to 8314069 919 CpG island CpG island 4394
Tssr112714 12 8313425 to 8313454 29 + TSS region transcription start site region 112714
Hs1bp3 12 8313433 to 8343824 30391 + protein coding gene HCLS1 binding protein 3
Tssr112715 12 8313455 to 8313462 7 + TSS region transcription start site region 112715
Tssr112716 12 8332201 to 8332214 13 + TSS region transcription start site region 112716
Tssr112717 12 8332218 to 8332228 10 + TSS region transcription start site region 112717
Gm48071 12 8335460 to 8336717 1257 - antisense lncRNA gene predicted gene, 48071
Tssr112718 12 8342932 to 8342955 23 + TSS region transcription start site region 112718
Tssr3784 12 8345144 to 8345154 10 + TSS region transcription start site region 3784
Tssr3785 12 8351365 to 8351375 10 - TSS region transcription start site region 3785
Tssr115702 12 8351381 to 8351403 22 - TSS region transcription start site region 115702
Tssr112719 12 8351540 to 8351545 5 + TSS region transcription start site region 112719
Tssr112720 12 8351571 to 8351576 5 + TSS region transcription start site region 112720
D12Mit183 12 8351876 to 8352145 269 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 183