Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:56294939-56525557

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4630 12 56301913 to 56302191 278 CpG island CpG island 4630
Mbip 12 56328306 to 56345895 17589 - protein coding gene MAP3K12 binding inhibitory protein 1
Cpgi4631 12 56345351 to 56345987 636 CpG island CpG island 4631
Tssr116364 12 56345772 to 56345788 16 - TSS region transcription start site region 116364
Tssr116365 12 56345792 to 56345842 50 - TSS region transcription start site region 116365
Tssr116366 12 56345862 to 56345888 26 - TSS region transcription start site region 116366
Cox6c2 12 56373593 to 56373823 230 - pseudogene cytochrome c oxidase subunit 6C2
Tssr116367 12 56373710 to 56373733 23 - TSS region transcription start site region 116367
Tssr116368 12 56373843 to 56373885 42 - TSS region transcription start site region 116368
Gm18027 12 56409939 to 56410557 618 - pseudogene predicted gene, 18027
Cpgi4632 12 56464293 to 56464575 282 CpG island CpG island 4632
Sfta3-ps 12 56490428 to 56529420 38992 - lncRNA gene surfactant associated 3, pseudogene
Tssr116369 12 56497397 to 56497430 33 - TSS region transcription start site region 116369
Tssr116370 12 56497550 to 56497560 10 - TSS region transcription start site region 116370
Tssr116371 12 56497729 to 56497733 4 - TSS region transcription start site region 116371
Gm47720 12 56498688 to 56500828 2140 - unclassified gene predicted gene, 47720
Tssr116372 12 56513936 to 56513968 32 - TSS region transcription start site region 116372
Cpgi4633 12 56519635 to 56520191 556 CpG island CpG island 4633
Cpgi4634 12 56520916 to 56521393 477 CpG island CpG island 4634
Tssr116373 12 56521340 to 56521351 11 - TSS region transcription start site region 116373
Tssr116374 12 56521388 to 56521397 9 - TSS region transcription start site region 116374
Tssr116375 12 56522185 to 56522198 13 - TSS region transcription start site region 116375
Tssr116376 12 56523254 to 56523266 12 - TSS region transcription start site region 116376