MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:56205703-56345729

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm36754	12	56235144 to 56239259	4115	-	lncRNA gene	predicted gene, 36754
Gm47682	12	56246648 to 56254398	7750	-	lincRNA gene	predicted gene, 47682
Gm25917	12	56252315 to 56252444	129	-	snoRNA gene	predicted gene, 25917
Tssr113509	12	56253147 to 56253162	15	+	TSS region	transcription start site region 113509
Tssr113510	12	56253188 to 56253212	24	+	TSS region	transcription start site region 113510
Tssr113511	12	56253228 to 56253248	20	+	TSS region	transcription start site region 113511
Gm19990	12	56253243 to 56266381	13138	+	lincRNA gene	predicted gene, 19990
Tssr113512	12	56253250 to 56253261	11	+	TSS region	transcription start site region 113512
Gm46351	12	56266003 to 56275945	9942	-	lncRNA gene	predicted gene, 46351
Gm24685	12	56266920 to 56267204	284	-	unclassified non-coding RNA gene	predicted gene, 24685
Cpgi4628	12	56275603 to 56275755	152		CpG island	CpG island 4628
Tssr116362	12	56275703 to 56275729	26	-	TSS region	transcription start site region 116362
Tssr116363	12	56275734 to 56275766	32	-	TSS region	transcription start site region 116363
Cpgi4629	12	56286713 to 56287018	305		CpG island	CpG island 4629
Tssr113513	12	56289166 to 56289174	8	+	TSS region	transcription start site region 113513
Tssr113514	12	56289227 to 56289234	7	+	TSS region	transcription start site region 113514
Cpgi4630	12	56301913 to 56302191	278		CpG island	CpG island 4630
Mbip	12	56328306 to 56345895	17589	-	protein coding gene	MAP3K12 binding inhibitory protein 1
Cpgi4631	12	56345351 to 56345987	636		CpG island	CpG island 4631