MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:55807727-55887731

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ralgapa1	12	55602896 to 55821167	218271	-	protein coding gene	Ral GTPase activating protein, alpha subunit 1
Gm48655	12	55815184 to 55816527	1343	-	unclassified gene	predicted gene, 48655
Cpgi4623	12	55820216 to 55821373	1157		CpG island	CpG island 4623
Gm9812	12	55820611 to 55821580	969	+	pseudogene	predicted gene 9812
Tssr116356	12	55821021 to 55821028	7	-	TSS region	transcription start site region 116356
Gm23394	12	55821063 to 55821153	90	-	miRNA gene	predicted gene, 23394
Tssr116357	12	55821073 to 55821084	11	-	TSS region	transcription start site region 116357
Tssr116358	12	55821098 to 55821110	12	-	TSS region	transcription start site region 116358
Tssr116359	12	55821137 to 55821149	12	-	TSS region	transcription start site region 116359
Tssr116360	12	55821157 to 55821195	38	-	TSS region	transcription start site region 116360
Tssr116361	12	55821196 to 55821207	11	-	TSS region	transcription start site region 116361
Cpgi4624	12	55836157 to 55837122	965		CpG island	CpG island 4624
Tssr113505	12	55836317 to 55836330	13	+	TSS region	transcription start site region 113505
Brms1l	12	55836324 to 55869736	33412	+	protein coding gene	breast cancer metastasis-suppressor 1-like
Tssr113506	12	55836332 to 55836361	29	+	TSS region	transcription start site region 113506
Tssr113507	12	55836365 to 55836408	43	+	TSS region	transcription start site region 113507
Tssr113508	12	55847727 to 55847731	4	+	TSS region	transcription start site region 113508
Cpgi4625	12	55861011 to 55861221	210		CpG island	CpG island 4625