Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:55685216-55956373

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ralgapa1 12 55602896 to 55821167 218271 - protein coding gene Ral GTPase activating protein, alpha subunit 1
D12Mit246 12 55747618 to 55747718 100 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 246
Tssr116355 12 55783317 to 55783318 1 - TSS region transcription start site region 116355
Gm48655 12 55815184 to 55816527 1343 - unclassified gene predicted gene, 48655
Cpgi4623 12 55820216 to 55821373 1157 CpG island CpG island 4623
Gm9812 12 55820611 to 55821580 969 + pseudogene predicted gene 9812
Tssr116356 12 55821021 to 55821028 7 - TSS region transcription start site region 116356
Gm23394 12 55821063 to 55821153 90 - miRNA gene predicted gene, 23394
Tssr116357 12 55821073 to 55821084 11 - TSS region transcription start site region 116357
Tssr116358 12 55821098 to 55821110 12 - TSS region transcription start site region 116358
Tssr116359 12 55821137 to 55821149 12 - TSS region transcription start site region 116359
Tssr116360 12 55821157 to 55821195 38 - TSS region transcription start site region 116360
Tssr116361 12 55821196 to 55821207 11 - TSS region transcription start site region 116361
Cpgi4624 12 55836157 to 55837122 965 CpG island CpG island 4624
Tssr113505 12 55836317 to 55836330 13 + TSS region transcription start site region 113505
Brms1l 12 55836324 to 55869736 33412 + protein coding gene breast cancer metastasis-suppressor 1-like
Tssr113506 12 55836332 to 55836361 29 + TSS region transcription start site region 113506
Tssr113507 12 55836365 to 55836408 43 + TSS region transcription start site region 113507
Tssr113508 12 55847727 to 55847731 4 + TSS region transcription start site region 113508
Cpgi4625 12 55861011 to 55861221 210 CpG island CpG island 4625
Gm22296 12 55910821 to 55910923 102 - snRNA gene predicted gene, 22296
Cpgi4626 12 55916781 to 55917384 603 CpG island CpG island 4626