Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:55450239-55681896

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit67 12 55451990 to 55452150 160 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 67
Tssr113495 12 55465802 to 55465825 23 + TSS region transcription start site region 113495
Tssr113496 12 55465848 to 55465864 16 + TSS region transcription start site region 113496
Tssr116341 12 55466365 to 55466372 7 - TSS region transcription start site region 116341
Tssr113497 12 55467945 to 55467951 6 + TSS region transcription start site region 113497
Tssr113498 12 55489409 to 55489415 6 + TSS region transcription start site region 113498
Nfkbia 12 55489410 to 55492647 3237 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha
Tssr116342 12 55489647 to 55489666 19 - TSS region transcription start site region 116342
Tssr116343 12 55489809 to 55489824 15 - TSS region transcription start site region 116343
Tssr116344 12 55489925 to 55489980 55 - TSS region transcription start site region 116344
Tssr113499 12 55490404 to 55490453 49 + TSS region transcription start site region 113499
Tssr116345 12 55490436 to 55490458 22 - TSS region transcription start site region 116345
Tssr116346 12 55490538 to 55490572 34 - TSS region transcription start site region 116346
Tssr116347 12 55491179 to 55491197 18 - TSS region transcription start site region 116347
Tssr116348 12 55491306 to 55491317 11 - TSS region transcription start site region 116348
Tssr116349 12 55491447 to 55491467 20 - TSS region transcription start site region 116349
Tssr116350 12 55491488 to 55491498 10 - TSS region transcription start site region 116350
Cpgi4619 12 55491563 to 55492861 1298 CpG island CpG island 4619
Tssr116351 12 55491700 to 55491715 15 - TSS region transcription start site region 116351
Tssr116352 12 55491738 to 55491777 39 - TSS region transcription start site region 116352
Tssr116353 12 55491781 to 55491801 20 - TSS region transcription start site region 116353
Tssr116354 12 55492587 to 55492605 18 - TSS region transcription start site region 116354
Tssr113500 12 55492698 to 55492727 29 + TSS region transcription start site region 113500
Gm36634 12 55497721 to 55499951 2230 + lncRNA gene predicted gene, 36634
Tssr113501 12 55507834 to 55507860 26 + TSS region transcription start site region 113501
Cpgi4620 12 55507841 to 55508000 159 CpG island CpG island 4620
Cpgi4621 12 55565154 to 55565682 528 CpG island CpG island 4621
Tssr113502 12 55565188 to 55565257 69 + TSS region transcription start site region 113502
Aldoart2 12 55565239 to 55566896 1657 + protein coding gene aldolase 1 A, retrogene 2
Tssr113503 12 55565261 to 55565267 6 + TSS region transcription start site region 113503
4921516I12Rik 12 55597218 to 55599412 2194 unclassified gene RIKEN cDNA 4921516I12 gene
Cpgi4622 12 55598698 to 55601256 2558 CpG island CpG island 4622
Tssr113504 12 55599424 to 55599429 5 + TSS region transcription start site region 113504
Insm2 12 55599427 to 55602086 2659 + protein coding gene insulinoma-associated 2
Ralgapa1 12 55602896 to 55821167 218271 - protein coding gene Ral GTPase activating protein, alpha subunit 1