Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:55180168-55313836

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Srp54b	12	55155104 to 55189213	34109	+	protein coding gene	signal recognition particle 54B
1700047I17Rik2	12	55199592 to 55217168	17576	+	protein coding gene	RIKEN cDNA 1700047I17 gene 2
Gm2446	12	55217176 to 55226072	8896	-	protein coding gene	predicted gene 2446
Gm48352	12	55227514 to 55227918	404	+	pseudogene	predicted gene, 48352
Srp54c	12	55230168 to 55263836	33668	+	protein coding gene	signal recognition particle 54C
Gm49376	12	55275381 to 55278714	3333	+	pseudogene	predicted gene, 49376
Ppp2r3c	12	55280809 to 55303005	22196	-	protein coding gene	protein phosphatase 2, regulatory subunit B'', gamma
Cpgi4615	12	55302501 to 55303232	731		CpG island	CpG island 4615
Tssr116332	12	55302620 to 55302623	3	-	TSS region	transcription start site region 116332
1110008L16Rik	12	55302637 to 55382492	79855	+	protein coding gene	RIKEN cDNA 1110008L16 gene
Tssr116333	12	55302645 to 55302725	80	-	TSS region	transcription start site region 116333
Tssr116334	12	55302737 to 55302746	9	-	TSS region	transcription start site region 116334
Tssr113481	12	55302744 to 55302784	40	+	TSS region	transcription start site region 113481
Tssr116335	12	55302767 to 55302778	11	-	TSS region	transcription start site region 116335
Tssr113482	12	55302824 to 55302864	40	+	TSS region	transcription start site region 113482
Tssr116336	12	55302959 to 55302968	9	-	TSS region	transcription start site region 116336
Tssr116337	12	55302974 to 55303014	40	-	TSS region	transcription start site region 116337
Tssr113483	12	55303241 to 55303284	43	+	TSS region	transcription start site region 113483