MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:55047109-55249896

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
2700097O09Rik	12	55045661 to 55080110	34449	-	protein coding gene	RIKEN cDNA 2700097O09 gene
Tssr116329	12	55053472 to 55053506	34	-	TSS region	transcription start site region 116329
Gm46350	12	55066503 to 55066917	414	-	pseudogene	predicted gene, 46350
Gm7511	12	55067752 to 55068201	449	-	pseudogene	predicted gene 7511
Cpgi4614	12	55080079 to 55080710	631		CpG island	CpG island 4614
Tssr116330	12	55080098 to 55080121	23	-	TSS region	transcription start site region 116330
Tssr116331	12	55080130 to 55080139	9	-	TSS region	transcription start site region 116331
Tssr113479	12	55080214 to 55080235	21	+	TSS region	transcription start site region 113479
Srp54a	12	55080496 to 55115367	34871	+	protein coding gene	signal recognition particle 54A
Tssr113480	12	55080528 to 55080560	32	+	TSS region	transcription start site region 113480
Fam177a	12	55124469 to 55142104	17635	+	protein coding gene	family with sequence similarity 177, member A
Gm2436	12	55142109 to 55151007	8898	-	protein coding gene	predicted gene 2436
Gm48340	12	55152450 to 55152854	404	+	pseudogene	predicted gene, 48340
Srp54b	12	55155104 to 55189213	34109	+	protein coding gene	signal recognition particle 54B
1700047I17Rik2	12	55199592 to 55217168	17576	+	protein coding gene	RIKEN cDNA 1700047I17 gene 2
Gm2446	12	55217176 to 55226072	8896	-	protein coding gene	predicted gene 2446
Gm48352	12	55227514 to 55227918	404	+	pseudogene	predicted gene, 48352
Srp54c	12	55230168 to 55263836	33668	+	protein coding gene	signal recognition particle 54C