MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:54439885-54663804

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr116297	12	54459472 to 54459478	6	-	TSS region	transcription start site region 116297
Gm36213	12	54463133 to 54479471	16338	-	lncRNA gene	predicted gene, 36213
Gm10465	12	54512421 to 54517079	4658	-	lincRNA gene	predicted gene 10465
Gm40425	12	54549885 to 54553804	3919	+	lncRNA gene	predicted gene, 40425
Tssr3845	12	54559233 to 54559246	13	+	TSS region	transcription start site region 3845
Tssr113475	12	54622530 to 54622575	45	+	TSS region	transcription start site region 113475
Gm6218	12	54622590 to 54623217	627	+	pseudogene	predicted gene 6218
D12Mit88	12	54638868 to 54639009	141		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 88
Sptssa	12	54645392 to 54656573	11181	-	protein coding gene	serine palmitoyltransferase, small subunit A
Mir1892	12	54645933 to 54646012	79	-	miRNA gene	microRNA 1892
Ahrq1	12	54649125 to 82619165	27970040		QTL	airway hyperresponsiveness QTL 1
D12Mit285	12	54649125 to 54649249	124		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 285
Tssr116298	12	54649871 to 54649877	6	-	TSS region	transcription start site region 116298
Cpgi4609	12	54656079 to 54656945	866		CpG island	CpG island 4609
Tssr116299	12	54656496 to 54656517	21	-	TSS region	transcription start site region 116299
Tssr113476	12	54656752 to 54656774	22	+	TSS region	transcription start site region 113476
Tssr113477	12	54656808 to 54656813	5	+	TSS region	transcription start site region 113477
Gm40884	12	54658820 to 54659907	1087	+	lincRNA gene	predicted gene, 40884