Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:54313133-54629471

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4608 12 54313103 to 54313489 386 CpG island CpG island 4608
Gm47552 12 54316164 to 54317015 851 - lincRNA gene predicted gene, 47552
Tssr113470 12 54343701 to 54343716 15 + TSS region transcription start site region 113470
Tssr113471 12 54343717 to 54343731 14 + TSS region transcription start site region 113471
Tssr113472 12 54343734 to 54343745 11 + TSS region transcription start site region 113472
Tssr113473 12 54343746 to 54343765 19 + TSS region transcription start site region 113473
Gm35895 12 54350824 to 54353264 2440 + lncRNA gene predicted gene, 35895
D12Mit66 12 54351421 to 54351568 147 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 66
Tssr116296 12 54369305 to 54369355 50 - TSS region transcription start site region 116296
Tssr3844 12 54374353 to 54374358 5 + TSS region transcription start site region 3844
Gm7550 12 54388042 to 54391318 3276 - lincRNA gene predicted gene 7550
Gm46328 12 54400204 to 54405656 5452 + lincRNA gene predicted gene, 46328
Tssr113474 12 54428035 to 54428044 9 + TSS region transcription start site region 113474
Gm47553 12 54428077 to 54428556 479 + pseudogene predicted gene, 47553
Gm7557 12 54429534 to 54430398 864 - pseudogene predicted gene 7557
Tssr116297 12 54459472 to 54459478 6 - TSS region transcription start site region 116297
Gm36213 12 54463133 to 54479471 16338 - lncRNA gene predicted gene, 36213
Gm10465 12 54512421 to 54517079 4658 - lincRNA gene predicted gene 10465
Gm40425 12 54549885 to 54553804 3919 + lncRNA gene predicted gene, 40425
Tssr3845 12 54559233 to 54559246 13 + TSS region transcription start site region 3845
Tssr113475 12 54622530 to 54622575 45 + TSS region transcription start site region 113475
Gm6218 12 54622590 to 54623217 627 + pseudogene predicted gene 6218