MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:54216164-54417015

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
1700104L18Rik	12	54233615 to 54242320	8705	+	lincRNA gene	RIKEN cDNA 1700104L18 gene
Gm22220	12	54239238 to 54239386	148	+	snRNA gene	predicted gene, 22220
Tssr113469	12	54239238 to 54239245	7	+	TSS region	transcription start site region 113469
Gm24692	12	54240755 to 54240900	145	-	snRNA gene	predicted gene, 24692
Tssr116295	12	54289748 to 54289751	3	-	TSS region	transcription start site region 116295
D12Mit31	12	54310282 to 54310668	386		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 31
Cpgi4608	12	54313103 to 54313489	386		CpG island	CpG island 4608
Gm47552	12	54316164 to 54317015	851	-	lincRNA gene	predicted gene, 47552
Tssr113470	12	54343701 to 54343716	15	+	TSS region	transcription start site region 113470
Tssr113471	12	54343717 to 54343731	14	+	TSS region	transcription start site region 113471
Tssr113472	12	54343734 to 54343745	11	+	TSS region	transcription start site region 113472
Tssr113473	12	54343746 to 54343765	19	+	TSS region	transcription start site region 113473
Gm35895	12	54350824 to 54353264	2440	+	lncRNA gene	predicted gene, 35895
D12Mit66	12	54351421 to 54351568	147		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 66
Tssr116296	12	54369305 to 54369355	50	-	TSS region	transcription start site region 116296
Tssr3844	12	54374353 to 54374358	5	+	TSS region	transcription start site region 3844
Gm7550	12	54388042 to 54391318	3276	-	lincRNA gene	predicted gene 7550
Gm46328	12	54400204 to 54405656	5452	+	lincRNA gene	predicted gene, 46328