MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:51640992-51741039

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Strn3	12	51609632 to 51691897	82265	-	protein coding gene	striatin, calmodulin binding protein 3
5730526G10Rik	12	51643886 to 51647521	3635		unclassified gene	RIKEN cDNA 5730526G10 gene
Tssr116248	12	51673601 to 51673609	8	-	TSS region	transcription start site region 116248
Cpgi4590	12	51690788 to 51692555	1767		CpG island	CpG island 4590
Ap4s1	12	51690928 to 51738939	48011	+	protein coding gene	adaptor-related protein complex AP-4, sigma 1
Tssr113419	12	51690992 to 51691039	47	+	TSS region	transcription start site region 113419
Tssr113420	12	51691125 to 51691140	15	+	TSS region	transcription start site region 113420
Tssr113421	12	51691200 to 51691232	32	+	TSS region	transcription start site region 113421
Tssr116249	12	51691707 to 51691712	5	-	TSS region	transcription start site region 116249
Tssr116250	12	51691883 to 51691925	42	-	TSS region	transcription start site region 116250
Tssr116251	12	51692004 to 51692009	5	-	TSS region	transcription start site region 116251
Tssr116252	12	51692013 to 51692026	13	-	TSS region	transcription start site region 116252
Tssr116253	12	51692051 to 51692058	7	-	TSS region	transcription start site region 116253
Tssr116254	12	51692075 to 51692092	17	-	TSS region	transcription start site region 116254
Tssr113422	12	51692644 to 51692646	2	+	TSS region	transcription start site region 113422
D12Mit237	12	51738999 to 51739298	299		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 237
Gm22663	12	51740241 to 51740342	101	-	snRNA gene	predicted gene, 22663