Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:49465309-50800236

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34381 12 49452793 to 49476037 23244 + lncRNA gene predicted gene, 34381
1810007C17Rik 12 49476993 to 49480862 3869 - lincRNA gene RIKEN cDNA 1810007C17 gene
Gm19599 12 49499008 to 49499365 357 + pseudogene predicted gene, 19599
Gm25015 12 49578456 to 49578583 127 - snoRNA gene predicted gene, 25015
Gm7476 12 49776115 to 49776775 660 - pseudogene predicted gene 7476
Tssr116232 12 49776819 to 49776820 1 - TSS region transcription start site region 116232
Gm7481 12 49840757 to 49841751 994 - pseudogene predicted gene 7481
Tssr116233 12 49841822 to 49841824 2 - TSS region transcription start site region 116233
Tssr113410 12 49949201 to 49949218 17 + TSS region transcription start site region 113410
Gm40419 12 50017406 to 50123358 105952 - lncRNA gene predicted gene, 40419
Gm40418 12 50120309 to 50145236 24927 + lincRNA gene predicted gene, 40418
Gm34523 12 50198069 to 50222058 23989 - lncRNA gene predicted gene, 34523
Prkd1 12 50341231 to 50649098 307867 - protein coding gene protein kinase D1
Tssr116234 12 50356031 to 50356034 3 - TSS region transcription start site region 116234
Tssr116235 12 50411424 to 50411429 5 - TSS region transcription start site region 116235
D12Mit64 12 50458226 to 50458363 137 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 64
C130009A20Rik 12 50622618 to 50631833 9215 unclassified non-coding RNA gene RIKEN cDNA C130009A20 gene
Gm10468 12 50623539 to 50626809 3270 unclassified gene predicted gene 10468
Cpgi4585 12 50648396 to 50649594 1198 CpG island CpG island 4585
Tssr116236 12 50649190 to 50649281 91 - TSS region transcription start site region 116236
Gm48779 12 50753097 to 50900985 147888 + lincRNA gene predicted gene, 48779