Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:48885256-49396266

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr1400-ps1 12 48903851 to 48904550 699 - pseudogene olfactory receptor 1400, pseudogene 1
Olfr1399-ps1 12 48905578 to 48905990 412 - pseudogene olfactory receptor 1399, pseudogene 1
Gm26454 12 49009883 to 49009989 106 + snRNA gene predicted gene, 26454
Gm7456 12 49140256 to 49141266 1010 + pseudogene predicted gene 7456
Gm18623 12 49324737 to 49325615 878 + pseudogene predicted gene, 18623
Gm34304 12 49368729 to 49381885 13156 - lincRNA gene predicted gene, 34304
Tssr113386 12 49377657 to 49377672 15 + TSS region transcription start site region 113386
Tssr113387 12 49377768 to 49377785 17 + TSS region transcription start site region 113387
Tssr113388 12 49377821 to 49377851 30 + TSS region transcription start site region 113388
Tssr116231 12 49381824 to 49381830 6 - TSS region transcription start site region 116231
Tssr113389 12 49381974 to 49381995 21 + TSS region transcription start site region 113389
Tssr113390 12 49382057 to 49382078 21 + TSS region transcription start site region 113390
Tssr113391 12 49382652 to 49382667 15 + TSS region transcription start site region 113391
Tssr113392 12 49382676 to 49382691 15 + TSS region transcription start site region 113392
Tssr113393 12 49382791 to 49382802 11 + TSS region transcription start site region 113393
Foxg1 12 49382883 to 49386867 3984 + protein coding gene forkhead box G1
Cpgi4581 12 49382961 to 49385884 2923 CpG island CpG island 4581
Tssr113394 12 49383085 to 49383105 20 + TSS region transcription start site region 113394
Tssr113395 12 49383917 to 49383963 46 + TSS region transcription start site region 113395
Tssr113396 12 49384125 to 49384157 32 + TSS region transcription start site region 113396
Tssr113397 12 49384258 to 49384282 24 + TSS region transcription start site region 113397
Tssr113398 12 49384287 to 49384316 29 + TSS region transcription start site region 113398
Tssr3838 12 49384332 to 49384343 11 + TSS region transcription start site region 3838
Tssr113399 12 49384356 to 49384365 9 + TSS region transcription start site region 113399
Tssr113400 12 49384366 to 49384398 32 + TSS region transcription start site region 113400
Tssr113401 12 49384510 to 49384523 13 + TSS region transcription start site region 113401
Tssr113402 12 49384560 to 49384580 20 + TSS region transcription start site region 113402
Tssr113403 12 49384935 to 49384946 11 + TSS region transcription start site region 113403
Tssr113404 12 49384961 to 49384972 11 + TSS region transcription start site region 113404
Tssr113405 12 49384986 to 49385028 42 + TSS region transcription start site region 113405
Gm43517 12 49385174 to 49394127 8953 + protein coding gene predicted gene 43517
Tssr113406 12 49385189 to 49385199 10 + TSS region transcription start site region 113406
Tssr113407 12 49385444 to 49385463 19 + TSS region transcription start site region 113407
Tssr113408 12 49385652 to 49385658 6 + TSS region transcription start site region 113408
3110039M20Rik 12 49389652 to 49407346 17694 + lincRNA gene RIKEN cDNA 3110039M20 gene
Tssr113409 12 49389859 to 49389894 35 + TSS region transcription start site region 113409
Cpgi4582 12 49391252 to 49392143 891 CpG island CpG island 4582
Cpgi4583 12 49394936 to 49395142 206 CpG island CpG island 4583