Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:46809048-48859062

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nova1 12 46694517 to 46818929 124412 - protein coding gene neuro-oncological ventral antigen 1
Gm48542 12 46806952 to 46811508 4556 - unclassified gene predicted gene, 48542
Tssr116212 12 46816923 to 46816961 38 - TSS region transcription start site region 116212
Cpgi4580 12 46817994 to 46820012 2018 CpG island CpG island 4580
Tssr116213 12 46818078 to 46818096 18 - TSS region transcription start site region 116213
Tssr116214 12 46818108 to 46818129 21 - TSS region transcription start site region 116214
Tssr116215 12 46818135 to 46818155 20 - TSS region transcription start site region 116215
Tssr116216 12 46818341 to 46818357 16 - TSS region transcription start site region 116216
Tssr116217 12 46818496 to 46818517 21 - TSS region transcription start site region 116217
Tssr116218 12 46818749 to 46818788 39 - TSS region transcription start site region 116218
Tssr116219 12 46818926 to 46818937 11 - TSS region transcription start site region 116219
Tssr116220 12 46818982 to 46819004 22 - TSS region transcription start site region 116220
Tssr116221 12 46819020 to 46819026 6 - TSS region transcription start site region 116221
Tssr116222 12 46819043 to 46819058 15 - TSS region transcription start site region 116222
Tssr116223 12 46819087 to 46819096 9 - TSS region transcription start site region 116223
Tssr116224 12 46819188 to 46819204 16 - TSS region transcription start site region 116224
Tssr116225 12 46819244 to 46819249 5 - TSS region transcription start site region 116225
Tssr116226 12 46819353 to 46819371 18 - TSS region transcription start site region 116226
Tssr116227 12 46819469 to 46819498 29 - TSS region transcription start site region 116227
Tssr116228 12 46819499 to 46819517 18 - TSS region transcription start site region 116228
Gm25051 12 46832559 to 46832807 248 - unclassified non-coding RNA gene predicted gene, 25051
Gm36971 12 47165042 to 47165507 465 + unclassified gene predicted gene, 36971
Gm2089 12 47199991 to 47200469 478 + pseudogene predicted gene 2089
Gm48578 12 47532257 to 47544289 12032 + lincRNA gene predicted gene, 48578
Tssr113381 12 47812877 to 47812889 12 + TSS region transcription start site region 113381
Gm7392 12 47812905 to 47813249 344 + pseudogene predicted gene 7392
Tssr113382 12 47812985 to 47813024 39 + TSS region transcription start site region 113382
Tssr113383 12 47833929 to 47833957 28 + TSS region transcription start site region 113383
Tssr116229 12 47833963 to 47833975 12 - TSS region transcription start site region 116229
Tssr113384 12 47833979 to 47833994 15 + TSS region transcription start site region 113384
Tssr113385 12 47834048 to 47834062 14 + TSS region transcription start site region 113385
Tssr116230 12 47834081 to 47834091 10 - TSS region transcription start site region 116230
D12Mit111 12 47942531 to 47942717 186 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 111
Gm46327 12 48047000 to 48047534 534 - pseudogene predicted gene, 46327
Gm46318 12 48133705 to 48133893 188 + pseudogene predicted gene, 46318
Gm48587 12 48495219 to 48495486 267 + pseudogene predicted gene, 48587
Tssr3837 12 48529624 to 48529632 8 - TSS region transcription start site region 3837
Gm1818 12 48555308 to 48559885 4577 - pseudogene predicted gene 1818
Gm29818 12 48632293 to 48632457 164 + pseudogene predicted gene, 29818