Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:46688979-48978994

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Asp1 12 35235497 to 46754950 11519453 QTL audiogenic seizure prone 1
B230217J21Rik 12 46667317 to 46692992 25675 + lincRNA gene RIKEN cDNA B230217J21 gene
Nova1 12 46694517 to 46818929 124412 - protein coding gene neuro-oncological ventral antigen 1
Tssr116207 12 46696999 to 46697024 25 - TSS region transcription start site region 116207
Tssr116208 12 46698620 to 46698623 3 - TSS region transcription start site region 116208
Gm33869 12 46701075 to 46704216 3141 - protein coding gene predicted gene, 33869
Tssr116209 12 46720836 to 46720844 8 - TSS region transcription start site region 116209
Gm48543 12 46725773 to 46728001 2228 - unclassified gene predicted gene, 48543
Gm40417 12 46751221 to 46766283 15062 - lncRNA gene predicted gene, 40417
Moen3 12 46754801 to 46754950 149 QTL modifier of engrailed QTL 3
D12Mit112 12 46754801 to 46754950 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 112
D12Dcr1 12 46754803 to 46754896 93 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 1
Tssr116210 12 46784314 to 46784318 4 - TSS region transcription start site region 116210
Tssr116211 12 46785269 to 46785272 3 - TSS region transcription start site region 116211
Gm48542 12 46806952 to 46811508 4556 - unclassified gene predicted gene, 48542
Tssr116212 12 46816923 to 46816961 38 - TSS region transcription start site region 116212
Cpgi4580 12 46817994 to 46820012 2018 CpG island CpG island 4580
Tssr116213 12 46818078 to 46818096 18 - TSS region transcription start site region 116213
Tssr116214 12 46818108 to 46818129 21 - TSS region transcription start site region 116214
Tssr116215 12 46818135 to 46818155 20 - TSS region transcription start site region 116215
Tssr116216 12 46818341 to 46818357 16 - TSS region transcription start site region 116216
Tssr116217 12 46818496 to 46818517 21 - TSS region transcription start site region 116217
Tssr116218 12 46818749 to 46818788 39 - TSS region transcription start site region 116218
Tssr116219 12 46818926 to 46818937 11 - TSS region transcription start site region 116219
Tssr116220 12 46818982 to 46819004 22 - TSS region transcription start site region 116220
Tssr116221 12 46819020 to 46819026 6 - TSS region transcription start site region 116221
Tssr116222 12 46819043 to 46819058 15 - TSS region transcription start site region 116222
Tssr116223 12 46819087 to 46819096 9 - TSS region transcription start site region 116223
Tssr116224 12 46819188 to 46819204 16 - TSS region transcription start site region 116224
Tssr116225 12 46819244 to 46819249 5 - TSS region transcription start site region 116225
Tssr116226 12 46819353 to 46819371 18 - TSS region transcription start site region 116226
Tssr116227 12 46819469 to 46819498 29 - TSS region transcription start site region 116227
Tssr116228 12 46819499 to 46819517 18 - TSS region transcription start site region 116228
Gm25051 12 46832559 to 46832807 248 - unclassified non-coding RNA gene predicted gene, 25051
Gm36971 12 47165042 to 47165507 465 + unclassified gene predicted gene, 36971
Gm2089 12 47199991 to 47200469 478 + pseudogene predicted gene 2089
Gm48578 12 47532257 to 47544289 12032 + lincRNA gene predicted gene, 48578
Tssr113381 12 47812877 to 47812889 12 + TSS region transcription start site region 113381
Gm7392 12 47812905 to 47813249 344 + pseudogene predicted gene 7392
Tssr113382 12 47812985 to 47813024 39 + TSS region transcription start site region 113382
Tssr113383 12 47833929 to 47833957 28 + TSS region transcription start site region 113383
Tssr116229 12 47833963 to 47833975 12 - TSS region transcription start site region 116229
Tssr113384 12 47833979 to 47833994 15 + TSS region transcription start site region 113384
Tssr113385 12 47834048 to 47834062 14 + TSS region transcription start site region 113385
Tssr116230 12 47834081 to 47834091 10 - TSS region transcription start site region 116230
D12Mit111 12 47942531 to 47942717 186 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 111
Gm46327 12 48047000 to 48047534 534 - pseudogene predicted gene, 46327
Gm46318 12 48133705 to 48133893 188 + pseudogene predicted gene, 46318
Gm48587 12 48495219 to 48495486 267 + pseudogene predicted gene, 48587
Tssr3837 12 48529624 to 48529632 8 - TSS region transcription start site region 3837
Gm1818 12 48555308 to 48559885 4577 - pseudogene predicted gene 1818
Gm29818 12 48632293 to 48632457 164 + pseudogene predicted gene, 29818
Olfr1400-ps1 12 48903851 to 48904550 699 - pseudogene olfactory receptor 1400, pseudogene 1
Olfr1399-ps1 12 48905578 to 48905990 412 - pseudogene olfactory receptor 1399, pseudogene 1