Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:46158688-46799327

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Asp1 12 35235497 to 46754950 11519453 QTL audiogenic seizure prone 1
Gm40416 12 46205646 to 46212149 6503 + lncRNA gene predicted gene, 40416
Gm18112 12 46269750 to 46273884 4134 - pseudogene predicted gene, 18112
Gm48531 12 46281906 to 46282229 323 + pseudogene predicted gene, 48531
Cpgi4579 12 46399285 to 46399699 414 CpG island CpG island 4579
Gm7422 12 46478688 to 46479327 639 - pseudogene predicted gene 7422
Tssr116206 12 46626705 to 46626706 1 - TSS region transcription start site region 116206
Gm48535 12 46658603 to 46665709 7106 - lincRNA gene predicted gene, 48535
B230217J21Rik 12 46667317 to 46692992 25675 + lincRNA gene RIKEN cDNA B230217J21 gene
Gm48536 12 46683145 to 46686474 3329 - unclassified gene predicted gene, 48536
Nova1 12 46694517 to 46818929 124412 - protein coding gene neuro-oncological ventral antigen 1
Tssr116207 12 46696999 to 46697024 25 - TSS region transcription start site region 116207
Tssr116208 12 46698620 to 46698623 3 - TSS region transcription start site region 116208
Gm33869 12 46701075 to 46704216 3141 - protein coding gene predicted gene, 33869
Tssr116209 12 46720836 to 46720844 8 - TSS region transcription start site region 116209
Gm48543 12 46725773 to 46728001 2228 - unclassified gene predicted gene, 48543
Gm40417 12 46751221 to 46766283 15062 - lncRNA gene predicted gene, 40417
Moen3 12 46754801 to 46754950 149 QTL modifier of engrailed QTL 3
D12Mit112 12 46754801 to 46754950 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 112
D12Dcr1 12 46754803 to 46754896 93 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 1
Tssr116210 12 46784314 to 46784318 4 - TSS region transcription start site region 116210
Tssr116211 12 46785269 to 46785272 3 - TSS region transcription start site region 116211