Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:45523902-46704101

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48517 12 45572431 to 45573287 856 - pseudogene predicted gene, 48517
Tssr116205 12 45573309 to 45573310 1 - TSS region transcription start site region 116205
Gm48518 12 45669499 to 45671793 2294 - unclassified gene predicted gene, 48518
Gm48522 12 45731415 to 45736901 5486 - lincRNA gene predicted gene, 48522
Gm33811 12 45970693 to 46111510 140817 + lncRNA gene predicted gene, 33811
Gm24948 12 45984343 to 45984549 206 + snoRNA gene predicted gene, 24948
Hdlq18 12 46113902 to 46114101 199 QTL HDL QTL 18
D12Mit172 12 46113902 to 46114101 199 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 172
Gct2 12 46113902 to 46114101 199 QTL granulosa cell tumorigenesis 2
Gm40416 12 46205646 to 46212149 6503 + lncRNA gene predicted gene, 40416
Gm18112 12 46269750 to 46273884 4134 - pseudogene predicted gene, 18112
Gm48531 12 46281906 to 46282229 323 + pseudogene predicted gene, 48531
Cpgi4579 12 46399285 to 46399699 414 CpG island CpG island 4579
Gm7422 12 46478688 to 46479327 639 - pseudogene predicted gene 7422
Tssr116206 12 46626705 to 46626706 1 - TSS region transcription start site region 116206
Gm48535 12 46658603 to 46665709 7106 - lincRNA gene predicted gene, 48535
B230217J21Rik 12 46667317 to 46692992 25675 + lincRNA gene RIKEN cDNA B230217J21 gene
Gm48536 12 46683145 to 46686474 3329 - unclassified gene predicted gene, 48536
Nova1 12 46694517 to 46818929 124412 - protein coding gene neuro-oncological ventral antigen 1
Tssr116207 12 46696999 to 46697024 25 - TSS region transcription start site region 116207
Tssr116208 12 46698620 to 46698623 3 - TSS region transcription start site region 116208
Gm33869 12 46701075 to 46704216 3141 - protein coding gene predicted gene, 33869