Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:44927431-46218287

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stxbp6 12 44852484 to 45074483 221999 - protein coding gene syntaxin binding protein 6 (amisyn)
Gm33548 12 44925017 to 44932943 7926 + lncRNA gene predicted gene, 33548
Tssr113379 12 44930505 to 44930508 3 + TSS region transcription start site region 113379
Gm15902 12 44959647 to 44970878 11231 - sense intronic lncRNA gene predicted gene 15902
Gm38487 12 45010826 to 45018433 7607 - lncRNA gene predicted gene, 38487
Cpgi4578 12 45073712 to 45074839 1127 CpG island CpG island 4578
Tssr116198 12 45074294 to 45074306 12 - TSS region transcription start site region 116198
Tssr116199 12 45074315 to 45074347 32 - TSS region transcription start site region 116199
Tssr116200 12 45074359 to 45074388 29 - TSS region transcription start site region 116200
Tssr116201 12 45074457 to 45074488 31 - TSS region transcription start site region 116201
Tssr116202 12 45075109 to 45075153 44 - TSS region transcription start site region 116202
Tssr116203 12 45086078 to 45086083 5 - TSS region transcription start site region 116203
Tssr113380 12 45094001 to 45094019 18 + TSS region transcription start site region 113380
Gm48508 12 45094012 to 45162048 68036 + lincRNA gene predicted gene, 48508
Tssr116204 12 45099454 to 45099463 9 - TSS region transcription start site region 116204
Gm24731 12 45109007 to 45109137 130 + snoRNA gene predicted gene, 24731
D12Mit236 12 45116358 to 45116478 120 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 236
Gm22076 12 45359699 to 45359782 83 + rRNA gene predicted gene, 22076
Gm9921 12 45429377 to 45441698 12321 + lincRNA gene predicted gene 9921
Gm33680 12 45466282 to 45495325 29043 + lincRNA gene predicted gene, 33680
Tssr3836 12 45468466 to 45468467 1 + TSS region transcription start site region 3836
Gm48517 12 45572431 to 45573287 856 - pseudogene predicted gene, 48517
Tssr116205 12 45573309 to 45573310 1 - TSS region transcription start site region 116205
Gm48518 12 45669499 to 45671793 2294 - unclassified gene predicted gene, 48518
Gm48522 12 45731415 to 45736901 5486 - lincRNA gene predicted gene, 48522
Gm33811 12 45970693 to 46111510 140817 + lncRNA gene predicted gene, 33811
Gm24948 12 45984343 to 45984549 206 + snoRNA gene predicted gene, 24948
Gct2 12 46113902 to 46114101 199 QTL granulosa cell tumorigenesis 2
D12Mit172 12 46113902 to 46114101 199 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 172
Hdlq18 12 46113902 to 46114101 199 QTL HDL QTL 18
Gm40416 12 46205646 to 46212149 6503 + lncRNA gene predicted gene, 40416