MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:44924294-45224306

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Stxbp6	12	44852484 to 45074483	221999	-	protein coding gene	syntaxin binding protein 6 (amisyn)
Gm15901	12	44923197 to 44924343	1146	+	pseudogene	predicted gene 15901
Gm33548	12	44925017 to 44932943	7926	+	lncRNA gene	predicted gene, 33548
Tssr113379	12	44930505 to 44930508	3	+	TSS region	transcription start site region 113379
Gm15902	12	44959647 to 44970878	11231	-	sense intronic lncRNA gene	predicted gene 15902
Gm38487	12	45010826 to 45018433	7607	-	lncRNA gene	predicted gene, 38487
Cpgi4578	12	45073712 to 45074839	1127		CpG island	CpG island 4578
Tssr116198	12	45074294 to 45074306	12	-	TSS region	transcription start site region 116198
Tssr116199	12	45074315 to 45074347	32	-	TSS region	transcription start site region 116199
Tssr116200	12	45074359 to 45074388	29	-	TSS region	transcription start site region 116200
Tssr116201	12	45074457 to 45074488	31	-	TSS region	transcription start site region 116201
Tssr116202	12	45075109 to 45075153	44	-	TSS region	transcription start site region 116202
Tssr116203	12	45086078 to 45086083	5	-	TSS region	transcription start site region 116203
Tssr113380	12	45094001 to 45094019	18	+	TSS region	transcription start site region 113380
Gm48508	12	45094012 to 45162048	68036	+	lincRNA gene	predicted gene, 48508
Tssr116204	12	45099454 to 45099463	9	-	TSS region	transcription start site region 116204
Gm24731	12	45109007 to 45109137	130	+	snoRNA gene	predicted gene, 24731
D12Mit236	12	45116358 to 45116478	120		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 236