MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:43900497-44250498

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm46349	12	43955897 to 43956679	782	-	lincRNA gene	predicted gene, 46349
Tssr3832	12	44075497 to 44075498	1	+	TSS region	transcription start site region 3832
Gm47056	12	44121756 to 44125600	3844	+	pseudogene	predicted gene, 47056
Gm7370	12	44202405 to 44203171	766	-	pseudogene	predicted gene 7370
Tssr116189	12	44203210 to 44203220	10	-	TSS region	transcription start site region 116189
Dnajb9	12	44205897 to 44210068	4171	-	protein coding gene	DnaJ heat shock protein family (Hsp40) member B9
Tssr116190	12	44207077 to 44207084	7	-	TSS region	transcription start site region 116190
Cpgi4574	12	44209304 to 44210534	1230		CpG island	CpG island 4574
Tssr116191	12	44210061 to 44210077	16	-	TSS region	transcription start site region 116191
Tssr116192	12	44210095 to 44210104	9	-	TSS region	transcription start site region 116192
Tssr116193	12	44210114 to 44210127	13	-	TSS region	transcription start site region 116193
Tssr116194	12	44210178 to 44210185	7	-	TSS region	transcription start site region 116194
Mir5627	12	44210313 to 44210373	60	+	miRNA gene	microRNA 5627
Tssr113358	12	44210371 to 44210394	23	+	TSS region	transcription start site region 113358
Tssr116195	12	44210378 to 44210388	10	-	TSS region	transcription start site region 116195
Gm47096	12	44220387 to 44269118	48731	-	lincRNA gene	predicted gene, 47096
Tssr113359	12	44221352 to 44221355	3	+	TSS region	transcription start site region 113359
Cpgi4575	12	44221651 to 44222322	671		CpG island	CpG island 4575
Gm2027	12	44221745 to 44223373	1628	+	pseudogene	predicted gene 2027