Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:41473515-42583521

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Immp2l 12 41024090 to 41955588 931498 + protein coding gene IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
Lrrn3 12 41451668 to 41486057 34389 - protein coding gene leucine rich repeat protein 3, neuronal
Tssr116186 12 41485944 to 41485960 16 - TSS region transcription start site region 116186
Tssr116187 12 41485980 to 41485995 15 - TSS region transcription start site region 116187
Tssr113353 12 41498937 to 41498939 2 + TSS region transcription start site region 113353
Gm47374 12 41545391 to 41547884 2493 + unclassified gene predicted gene, 47374
Gm40412 12 41593438 to 41607709 14271 - lncRNA gene predicted gene, 40412
Splwt1 12 41646392 to 90920752 49274360 QTL spleen weight 1
D12Mit2 12 41646392 to 41646525 133 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 2
Gm47369 12 41684394 to 41684718 324 + pseudogene predicted gene, 47369
Tssr113354 12 41732418 to 41732421 3 + TSS region transcription start site region 113354
D12Mit244 12 41763238 to 41763345 107 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 244
Gm47371 12 41798182 to 41828523 30341 - antisense lncRNA gene predicted gene, 47371
Tssr113355 12 41825804 to 41825808 4 + TSS region transcription start site region 113355
Tssr116188 12 41878596 to 41878634 38 - TSS region transcription start site region 116188
Gm46348 12 41951821 to 41992035 40214 - lincRNA gene predicted gene, 46348
Gm47012 12 42017880 to 42025420 7540 + pseudogene predicted gene, 47012
Gm7242 12 42028212 to 42028913 701 + pseudogene predicted gene 7242
Tssr113356 12 42028515 to 42028521 6 + TSS region transcription start site region 113356
D12Mit109 12 42047938 to 42048061 123 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 109
Gm47013 12 42088439 to 42115803 27364 + lincRNA gene predicted gene, 47013
Gm47020 12 42117824 to 42151840 34016 - lincRNA gene predicted gene, 47020
Gm25248 12 42281716 to 42281813 97 + miRNA gene predicted gene, 25248
Tssr3831 12 42346718 to 42346719 1 + TSS region transcription start site region 3831
n-TEctc2 12 42415075 to 42415146 71 - tRNA gene nuclear encoded tRNA glutamic acid 2 (anticodon CTC)
D12Mit187 12 42468920 to 42469014 94 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 187