Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:40666855-41370252

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dock4 12 40445957 to 40846874 400917 + protein coding gene dedicator of cytokinesis 4
4732465E10Rik 12 40688009 to 40692090 4081 unclassified gene RIKEN cDNA 4732465E10 gene
Tssr113338 12 40695501 to 40695504 3 + TSS region transcription start site region 113338
Tssr113339 12 40712042 to 40712048 6 + TSS region transcription start site region 113339
Tssr113340 12 40718375 to 40718378 3 + TSS region transcription start site region 113340
5730420F10Rik 12 40768889 to 40770575 1686 unclassified gene RIKEN cDNA 5730420F10 gene
Tssr113341 12 40794259 to 40794271 12 + TSS region transcription start site region 113341
Tssr113342 12 40794284 to 40794298 14 + TSS region transcription start site region 113342
Cpgi4572 12 40844172 to 40844555 383 CpG island CpG island 4572
Gm19441 12 40875537 to 40875866 329 + pseudogene predicted gene, 19441
Gm7239 12 40883758 to 40884614 856 - pseudogene predicted gene 7239
Gm19220 12 40893485 to 40894287 802 + pseudogene predicted gene, 19220
Gm18246 12 40917348 to 40917917 569 + pseudogene predicted gene, 18246
Tssr3830 12 41013303 to 41013313 10 + TSS region transcription start site region 3830
Gm18954 12 41016855 to 41020252 3397 - pseudogene predicted gene, 18954
Cpgi4573 12 41023776 to 41024698 922 CpG island CpG island 4573
Immp2l 12 41024090 to 41955588 931498 + protein coding gene IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
Tssr113343 12 41024096 to 41024134 38 + TSS region transcription start site region 113343
Tssr113344 12 41024355 to 41024367 12 + TSS region transcription start site region 113344
Tssr113345 12 41024379 to 41024390 11 + TSS region transcription start site region 113345
Gm47375 12 41041824 to 41044939 3115 - antisense lncRNA gene predicted gene, 47375
Gm4274 12 41116217 to 41146574 30357 - pseudogene predicted gene 4274
Tssr113346 12 41151090 to 41151102 12 + TSS region transcription start site region 113346
Tssr113347 12 41192887 to 41192890 3 + TSS region transcription start site region 113347
Tssr113348 12 41253693 to 41253704 11 + TSS region transcription start site region 113348
Tssr113349 12 41257284 to 41257285 1 + TSS region transcription start site region 113349
Tssr113350 12 41261054 to 41261058 4 + TSS region transcription start site region 113350
Tssr113351 12 41263234 to 41263238 4 + TSS region transcription start site region 113351
Gm47376 12 41342820 to 41348090 5270 - antisense lncRNA gene predicted gene, 47376
Tssr116183 12 41348093 to 41348104 11 - TSS region transcription start site region 116183
Gm25497 12 41348441 to 41348572 131 - snoRNA gene predicted gene, 25497
D12Mit125 12 41351866 to 41352060 194 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 125