MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:4007403-4147624

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Efr3b	12	3962554 to 4038915	76361	-	protein coding gene	EFR3 homolog B
Cpgi4372	12	4037960 to 4039289	1329		CpG island	CpG island 4372
Tssr115625	12	4038774 to 4038855	81	-	TSS region	transcription start site region 115625
Tssr115626	12	4038868 to 4038879	11	-	TSS region	transcription start site region 115626
Tssr115627	12	4038905 to 4038957	52	-	TSS region	transcription start site region 115627
Gm48122	12	4077403 to 4077624	221	-	pseudogene	predicted gene, 48122
Cpgi4373	12	4082258 to 4083032	774		CpG island	CpG island 4373
Tssr112543	12	4082575 to 4082594	19	+	TSS region	transcription start site region 112543
Dnajc27	12	4082583 to 4110606	28023	+	protein coding gene	DnaJ heat shock protein family (Hsp40) member C27
Tssr112544	12	4082596 to 4082638	42	+	TSS region	transcription start site region 112544
Tssr112545	12	4082641 to 4082652	11	+	TSS region	transcription start site region 112545
Cpgi4374	12	4132875 to 4134067	1192		CpG island	CpG island 4374
Tssr112546	12	4133047 to 4133126	79	+	TSS region	transcription start site region 112546
Adcy3	12	4133103 to 4213525	80422	+	protein coding gene	adenylate cyclase 3
Tssr112547	12	4133394 to 4133411	17	+	TSS region	transcription start site region 112547
Tssr112548	12	4133421 to 4133426	5	+	TSS region	transcription start site region 112548
Tssr112549	12	4133510 to 4133518	8	+	TSS region	transcription start site region 112549
Cpgi4375	12	4134358 to 4134556	198		CpG island	CpG island 4375
Gm31794	12	4144328 to 4146825	2497	-	lncRNA gene	predicted gene, 31794