Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:39126415-40116546

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34809 12 39074465 to 39154735 80270 - lincRNA gene predicted gene, 34809
Gm18591 12 39208892 to 39209654 762 + pseudogene predicted gene, 18591
Gm47855 12 39397653 to 39398556 903 - lincRNA gene predicted gene, 47855
Gm24069 12 39461530 to 39461656 126 + snoRNA gene predicted gene, 24069
Gm34923 12 39490689 to 39526901 36212 - lincRNA gene predicted gene, 34923
Gm47859 12 39515934 to 39521395 5461 - lincRNA gene predicted gene, 47859
Gm24434 12 39621415 to 39621546 131 + snoRNA gene predicted gene, 24434
Gm18116 12 39765186 to 39765722 536 + pseudogene predicted gene, 18116
Gm4263 12 39874770 to 39875939 1169 + pseudogene predicted gene 4263
Gm47868 12 39899010 to 39922859 23849 - lincRNA gene predicted gene, 47868
Tssr113298 12 39941581 to 39941584 3 + TSS region transcription start site region 113298
Gm40399 12 39942477 to 39950626 8149 - lncRNA gene predicted gene, 40399
Gm18939 12 39948444 to 39949124 680 - pseudogene predicted gene, 18939
Tssr116148 12 39975033 to 39975037 4 - TSS region transcription start site region 116148
Bmiq11 12 40000000 to 8000000 -32000000 QTL body mass index QTL 11
Tssr116149 12 40014482 to 40014494 12 - TSS region transcription start site region 116149
Cpgi4567 12 40017100 to 40017290 190 CpG island CpG island 4567
Arl4a 12 40033291 to 40037987 4696 - protein coding gene ADP-ribosylation factor-like 4A
Cpgi4568 12 40037087 to 40038522 1435 CpG island CpG island 4568
Tssr116150 12 40037368 to 40037382 14 - TSS region transcription start site region 116150
Tssr116151 12 40037387 to 40037411 24 - TSS region transcription start site region 116151
Tssr116152 12 40037624 to 40037630 6 - TSS region transcription start site region 116152
Tssr116153 12 40037655 to 40037667 12 - TSS region transcription start site region 116153
Tssr116154 12 40037919 to 40038013 94 - TSS region transcription start site region 116154
Tssr116155 12 40038030 to 40038041 11 - TSS region transcription start site region 116155
Tssr113299 12 40038070 to 40038091 21 + TSS region transcription start site region 113299
Tssr113300 12 40038093 to 40038107 14 + TSS region transcription start site region 113300
Arl4aos 12 40038099 to 40040027 1928 + antisense lncRNA gene ADP-ribosylation factor-like 4A, opposite strand
Tssr113301 12 40038109 to 40038118 9 + TSS region transcription start site region 113301
Tssr116156 12 40038210 to 40038222 12 - TSS region transcription start site region 116156
Tssr113302 12 40038321 to 40038335 14 + TSS region transcription start site region 113302
Scin 12 40059769 to 40134228 74459 - protein coding gene scinderin
Tssr116157 12 40083428 to 40083471 43 - TSS region transcription start site region 116157
Tssr116158 12 40105004 to 40105018 14 - TSS region transcription start site region 116158
Tssr116159 12 40107108 to 40107129 21 - TSS region transcription start site region 116159
Tssr113303 12 40108368 to 40108374 6 + TSS region transcription start site region 113303
Tssr113304 12 40108412 to 40108434 22 + TSS region transcription start site region 113304
Tssr116160 12 40114127 to 40114164 37 - TSS region transcription start site region 116160