Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:38778892-39639654

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4566 12 38778552 to 38779139 587 CpG island CpG island 4566
Etv1 12 38779656 to 38868215 88559 + protein coding gene ets variant 1
Tssr113280 12 38780104 to 38780117 13 + TSS region transcription start site region 113280
Tssr113281 12 38780254 to 38780261 7 + TSS region transcription start site region 113281
Tssr113282 12 38780286 to 38780326 40 + TSS region transcription start site region 113282
Tssr113283 12 38780817 to 38780854 37 + TSS region transcription start site region 113283
Tssr3827 12 38781073 to 38781088 15 + TSS region transcription start site region 3827
Tssr113284 12 38781093 to 38781128 35 + TSS region transcription start site region 113284
Tssr3828 12 38783417 to 38783420 3 + TSS region transcription start site region 3828
Tssr113285 12 38783455 to 38783482 27 + TSS region transcription start site region 113285
Tssr113286 12 38783488 to 38783495 7 + TSS region transcription start site region 113286
Tssr113287 12 38783503 to 38783527 24 + TSS region transcription start site region 113287
Tssr113288 12 38783619 to 38783662 43 + TSS region transcription start site region 113288
Tssr113289 12 38783673 to 38783684 11 + TSS region transcription start site region 113289
Tssr113290 12 38783703 to 38783722 19 + TSS region transcription start site region 113290
Tssr113291 12 38784367 to 38784411 44 + TSS region transcription start site region 113291
Tssr113292 12 38829753 to 38829757 4 + TSS region transcription start site region 113292
Tssr113293 12 38861017 to 38861026 9 + TSS region transcription start site region 113293
Tssr113294 12 38861027 to 38861066 39 + TSS region transcription start site region 113294
Tssr113295 12 38868024 to 38868039 15 + TSS region transcription start site region 113295
Tssr113296 12 38868151 to 38868158 7 + TSS region transcription start site region 113296
Gm18442 12 38875450 to 38876024 574 + pseudogene predicted gene, 18442
Gm34611 12 38906055 to 38906953 898 - lincRNA gene predicted gene, 34611
Gm47832 12 38936413 to 38937049 636 - pseudogene predicted gene, 47832
Gm34662 12 38982438 to 38984000 1562 - lincRNA gene predicted gene, 34662
Tssr113297 12 38998542 to 38998546 4 + TSS region transcription start site region 113297
Gm19563 12 38998654 to 38998923 269 + pseudogene predicted gene, 19563
Tssr116147 12 39006943 to 39006951 8 - TSS region transcription start site region 116147
Gm34809 12 39074465 to 39154735 80270 - lincRNA gene predicted gene, 34809
Skts5 12 39098867 to 39099017 150 QTL skin tumor susceptibility 5
D12Mit154 12 39098867 to 39099017 150 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 154
Gm18591 12 39208892 to 39209654 762 + pseudogene predicted gene, 18591
Gm47855 12 39397653 to 39398556 903 - lincRNA gene predicted gene, 47855
Gm24069 12 39461530 to 39461656 126 + snoRNA gene predicted gene, 24069
Gm34923 12 39490689 to 39526901 36212 - lincRNA gene predicted gene, 34923
Gm47859 12 39515934 to 39521395 5461 - lincRNA gene predicted gene, 47859
Gm24434 12 39621415 to 39621546 131 + snoRNA gene predicted gene, 24434