Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:36257790-36807799

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40392 12 36264963 to 36291019 26056 + lincRNA gene predicted gene, 40392
Tssr113233 12 36314137 to 36314148 11 + TSS region transcription start site region 113233
Tssr113234 12 36314160 to 36314171 11 + TSS region transcription start site region 113234
Sostdc1 12 36314169 to 36318452 4283 + protein coding gene sclerostin domain containing 1
Tssr113235 12 36314216 to 36314232 16 + TSS region transcription start site region 113235
Tssr113236 12 36314426 to 36314438 12 + TSS region transcription start site region 113236
Cpgi4561 12 36317050 to 36317555 505 CpG island CpG island 4561
Tssr113237 12 36326302 to 36326345 43 + TSS region transcription start site region 113237
Gm34215 12 36330333 to 36331900 1567 + lincRNA gene predicted gene, 34215
Gm25438 12 36373774 to 36373883 109 - snoRNA gene predicted gene, 25438
D630036H23Rik 12 36381242 to 36382181 939 - protein coding gene RIKEN cDNA D630036H23 gene
Cpgi4562 12 36381446 to 36382255 809 CpG island CpG island 4562
Crppa 12 36381450 to 36689503 308053 + protein coding gene CDP-L-ribitol pyrophosphorylase A
Tssr113238 12 36381548 to 36381594 46 + TSS region transcription start site region 113238
Tssr113239 12 36532790 to 36532799 9 + TSS region transcription start site region 113239
Gm7252 12 36539357 to 36539812 455 + pseudogene predicted gene 7252
Tssr3826 12 36569911 to 36569913 2 + TSS region transcription start site region 3826
Tssr113240 12 36607464 to 36607468 4 + TSS region transcription start site region 113240
Tssr116142 12 36627395 to 36627413 18 - TSS region transcription start site region 116142
Tssr113241 12 36676718 to 36676727 9 + TSS region transcription start site region 113241
Tssr113242 12 36676750 to 36676758 8 + TSS region transcription start site region 113242
Tssr113243 12 36677323 to 36677344 21 + TSS region transcription start site region 113243
Tssr113244 12 36677368 to 36677369 1 + TSS region transcription start site region 113244
Edlmmq10 12 36689834 to 36689834 0 QTL extensor digitorum longus muscle mass QTL 10
D12Mit271 12 36800215 to 36800333 118 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 271