MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:36226548-36536594

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lrrc72	12	36208345 to 36253398	45053	-	protein coding gene	leucine rich repeat containing 72
Gm40390	12	36249901 to 36253763	3862	+	lncRNA gene	predicted gene, 40390
Tssr116141	12	36253396 to 36253425	29	-	TSS region	transcription start site region 116141
Gm40392	12	36264963 to 36291019	26056	+	lincRNA gene	predicted gene, 40392
Tssr113233	12	36314137 to 36314148	11	+	TSS region	transcription start site region 113233
Tssr113234	12	36314160 to 36314171	11	+	TSS region	transcription start site region 113234
Sostdc1	12	36314169 to 36318452	4283	+	protein coding gene	sclerostin domain containing 1
Tssr113235	12	36314216 to 36314232	16	+	TSS region	transcription start site region 113235
Tssr113236	12	36314426 to 36314438	12	+	TSS region	transcription start site region 113236
Cpgi4561	12	36317050 to 36317555	505		CpG island	CpG island 4561
Tssr113237	12	36326302 to 36326345	43	+	TSS region	transcription start site region 113237
Gm34215	12	36330333 to 36331900	1567	+	lincRNA gene	predicted gene, 34215
Gm25438	12	36373774 to 36373883	109	-	snoRNA gene	predicted gene, 25438
D630036H23Rik	12	36381242 to 36382181	939	-	protein coding gene	RIKEN cDNA D630036H23 gene
Cpgi4562	12	36381446 to 36382255	809		CpG island	CpG island 4562
Crppa	12	36381450 to 36689503	308053	+	protein coding gene	CDP-L-ribitol pyrophosphorylase A
Tssr113238	12	36381548 to 36381594	46	+	TSS region	transcription start site region 113238
Tssr113239	12	36532790 to 36532799	9	+	TSS region	transcription start site region 113239