MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:35900527-36140546

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Eccp	12	35901444 to 82619165	46717721		heritable phenotypic marker	eccentric pupil
D12Mit221	12	35901444 to 35901551	107		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 221
Agr3	12	35925621 to 35949737	24116	+	protein coding gene	anterior gradient 3
Tssr113226	12	35925661 to 35925671	10	+	TSS region	transcription start site region 113226
Tssr113227	12	35925679 to 35925708	29	+	TSS region	transcription start site region 113227
Tssr113228	12	35992900 to 35992917	17	+	TSS region	transcription start site region 113228
Agr2	12	35992925 to 36004081	11156	+	protein coding gene	anterior gradient 2
Tspan13	12	36014555 to 36042478	27923	-	protein coding gene	tetraspanin 13
Tssr116131	12	36019675 to 36019693	18	-	TSS region	transcription start site region 116131
Tssr113229	12	36020527 to 36020546	19	+	TSS region	transcription start site region 113229
Tssr116132	12	36020562 to 36020596	34	-	TSS region	transcription start site region 116132
Tssr116133	12	36039550 to 36039566	16	-	TSS region	transcription start site region 116133
Cpgi4558	12	36041780 to 36042831	1051		CpG island	CpG island 4558
Tssr116134	12	36042451 to 36042462	11	-	TSS region	transcription start site region 116134
Tssr116135	12	36042476 to 36042516	40	-	TSS region	transcription start site region 116135
Gm5434	12	36090379 to 36091829	1450	+	pseudogene	predicted gene 5434
Bzw2	12	36091835 to 36156825	64990	-	protein coding gene	basic leucine zipper and W2 domains 2
Gm18115	12	36115079 to 36115671	592	+	pseudogene	predicted gene, 18115