Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:34919967-35500068

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33864 12 34933435 to 34990883 57448 - lncRNA gene predicted gene, 33864
Tssr113210 12 34984748 to 34984758 10 + TSS region transcription start site region 113210
Prps1l1 12 34984761 to 34986436 1675 + protein coding gene phosphoribosyl pyrophosphate synthetase 1-like 1
Tssr113211 12 34984776 to 34984814 38 + TSS region transcription start site region 113211
Tssr113212 12 34984818 to 34984838 20 + TSS region transcription start site region 113212
Tssr113213 12 34984852 to 34984873 21 + TSS region transcription start site region 113213
Tssr113214 12 34990610 to 34990615 5 + TSS region transcription start site region 113214
Gm40385 12 34990945 to 35021568 30623 - lncRNA gene predicted gene, 40385
Gm24359 12 35000337 to 35000557 220 - unclassified non-coding RNA gene predicted gene, 24359
Tssr116122 12 35021427 to 35021443 16 - TSS region transcription start site region 116122
Gm40386 12 35038321 to 35042667 4346 + lncRNA gene predicted gene, 40386
Gm33922 12 35039446 to 35043459 4013 - lncRNA gene predicted gene, 33922
D12Mit46 12 35041005 to 35041138 133 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 46
Bbaa10 12 35041005 to 65464245 30423240 QTL B.burgdorferi-associated arthritis 10
Cpgi4556 12 35046654 to 35048023 1369 CpG island CpG island 4556
Tssr113215 12 35047180 to 35047230 50 + TSS region transcription start site region 113215
Snx13 12 35047186 to 35147479 100293 + protein coding gene sorting nexin 13
Tssr113216 12 35047252 to 35047263 11 + TSS region transcription start site region 113216
Tssr116123 12 35047795 to 35047807 12 - TSS region transcription start site region 116123
Tssr113217 12 35050993 to 35050999 6 + TSS region transcription start site region 113217
Gm10933 12 35055101 to 35056961 1860 + unclassified gene predicted gene 10933
Tssr113218 12 35097693 to 35097720 27 + TSS region transcription start site region 113218
Tssr113219 12 35135986 to 35136005 19 + TSS region transcription start site region 113219
Gm48137 12 35140892 to 35143130 2238 + unclassified gene predicted gene, 48137
Mir680-3 12 35194811 to 35194897 86 - miRNA gene microRNA 680-3
D12Mit243 12 35209967 to 35210068 101 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 243
Ath18 12 35209967 to 35210068 101 QTL atherosclerosis 18
D12Mit153 12 35235497 to 35235638 141 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 153
Asp1 12 35235497 to 46754950 11519453 QTL audiogenic seizure prone 1
Gm44396 12 35308891 to 35309004 113 + miRNA gene predicted gene, 44396
Gm26071 12 35441190 to 35441296 106 + snRNA gene predicted gene, 26071
Ahr 12 35497979 to 35534989 37010 - protein coding gene aryl-hydrocarbon receptor
Tbqt3 12 109969809 to 35235497 -74734312 QTL tibia bone quality traits 3