Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:33782723-34642731

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr3824 12 33845519 to 33845521 2 + TSS region transcription start site region 3824
Gm9370 12 33846454 to 33847062 608 + pseudogene predicted gene 9370
Gm40383 12 33913782 to 33936304 22522 - bidirectional promoter lncRNA gene predicted gene, 40383
Tssr113203 12 33928402 to 33928407 5 + TSS region transcription start site region 113203
Ferd3l 12 33928425 to 33929310 885 + protein coding gene Fer3 like bHLH transcription factor
Cpgi4550 12 33928645 to 33929129 484 CpG island CpG island 4550
Tssr116108 12 33936291 to 33936307 16 - TSS region transcription start site region 116108
Cpgi4551 12 33956873 to 33958914 2041 CpG island CpG island 4551
Tssr113204 12 33957645 to 33957665 20 + TSS region transcription start site region 113204
Twist1 12 33957671 to 33959829 2158 + protein coding gene twist basic helix-loop-helix transcription factor 1
Tssr113205 12 33957817 to 33957888 71 + TSS region transcription start site region 113205
Cpgi4552 12 33962433 to 33962673 240 CpG island CpG island 4552
Tssr113206 12 33964336 to 33964340 4 + TSS region transcription start site region 113206
Tssr113207 12 33965061 to 33965065 4 + TSS region transcription start site region 113207
Cpgi4553 12 33967502 to 33967842 340 CpG island CpG island 4553
Cpgi4554 12 33968511 to 33968734 223 CpG island CpG island 4554
Hdac9 12 34047580 to 34917095 869515 - protein coding gene histone deacetylase 9
Gm40384 12 34086586 to 34095984 9398 + lncRNA gene predicted gene, 40384
Tssr116109 12 34212723 to 34212731 8 - TSS region transcription start site region 116109
Gm18025 12 34290274 to 34291135 861 - pseudogene predicted gene, 18025
Tssr116110 12 34528844 to 34528904 60 - TSS region transcription start site region 116110
Tssr116111 12 34528909 to 34528927 18 - TSS region transcription start site region 116111
Gm47357 12 34623907 to 34628638 4731 - sense intronic lncRNA gene predicted gene, 47357
Tssr116112 12 34639517 to 34639519 2 - TSS region transcription start site region 116112