MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:33777645-34137665

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi4549	12	33780876 to 33781235	359		CpG island	CpG island 4549
Tssr3824	12	33845519 to 33845521	2	+	TSS region	transcription start site region 3824
Gm9370	12	33846454 to 33847062	608	+	pseudogene	predicted gene 9370
Gm40383	12	33913782 to 33936304	22522	-	bidirectional promoter lncRNA gene	predicted gene, 40383
Tssr113203	12	33928402 to 33928407	5	+	TSS region	transcription start site region 113203
Ferd3l	12	33928425 to 33929310	885	+	protein coding gene	Fer3 like bHLH transcription factor
Cpgi4550	12	33928645 to 33929129	484		CpG island	CpG island 4550
Tssr116108	12	33936291 to 33936307	16	-	TSS region	transcription start site region 116108
Cpgi4551	12	33956873 to 33958914	2041		CpG island	CpG island 4551
Tssr113204	12	33957645 to 33957665	20	+	TSS region	transcription start site region 113204
Twist1	12	33957671 to 33959829	2158	+	protein coding gene	twist basic helix-loop-helix transcription factor 1
Tssr113205	12	33957817 to 33957888	71	+	TSS region	transcription start site region 113205
Cpgi4552	12	33962433 to 33962673	240		CpG island	CpG island 4552
Tssr113206	12	33964336 to 33964340	4	+	TSS region	transcription start site region 113206
Tssr113207	12	33965061 to 33965065	4	+	TSS region	transcription start site region 113207
Cpgi4553	12	33967502 to 33967842	340		CpG island	CpG island 4553
Cpgi4554	12	33968511 to 33968734	223		CpG island	CpG island 4554
Hdac9	12	34047580 to 34917095	869515	-	protein coding gene	histone deacetylase 9
Gm40384	12	34086586 to 34095984	9398	+	lncRNA gene	predicted gene, 40384