MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:3377711-3477722

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kif3c	12	3365132 to 3406494	41362	+	protein coding gene	kinesin family member 3C
Gm48512	12	3367248 to 3404066	36818	-	antisense lncRNA gene	predicted gene, 48512
Cpgi4357	12	3388018 to 3388182	164		CpG island	CpG island 4357
1110002L01Rik	12	3403883 to 3426747	22864	-	antisense lncRNA gene	RIKEN cDNA 1110002L01 gene
Cpgi4358	12	3426446 to 3427753	1307		CpG island	CpG island 4358
Tssr115605	12	3426630 to 3426664	34	-	TSS region	transcription start site region 115605
Tssr115606	12	3426676 to 3426691	15	-	TSS region	transcription start site region 115606
Tssr115607	12	3426700 to 3426782	82	-	TSS region	transcription start site region 115607
Asxl2	12	3426857 to 3506852	79995	+	protein coding gene	additional sex combs like 2, transcriptional regulator
Tssr112487	12	3426878 to 3426931	53	+	TSS region	transcription start site region 112487
Tssr115608	12	3427518 to 3427533	15	-	TSS region	transcription start site region 115608
Tssr115609	12	3427711 to 3427722	11	-	TSS region	transcription start site region 115609
Tssr115610	12	3427739 to 3427802	63	-	TSS region	transcription start site region 115610
Gm31332	12	3438290 to 3442403	4113	+	pseudogene	predicted gene, 31332
Tssr112488	12	3438355 to 3438358	3	+	TSS region	transcription start site region 112488
Tssr112489	12	3457560 to 3457588	28	+	TSS region	transcription start site region 112489
Tssr112490	12	3463372 to 3463386	14	+	TSS region	transcription start site region 112490
Tssr112491	12	3463400 to 3463409	9	+	TSS region	transcription start site region 112491