Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:33347712-33557843

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atxn7l1 12 33147693 to 33373185 225492 + protein coding gene ataxin 7-like 1
Tssr113196 12 33348402 to 33348408 6 + TSS region transcription start site region 113196
Atxn7l1os2 12 33358243 to 33394760 36517 - antisense lncRNA gene ataxin 7-like 1, opposite strand 2
Tssr113197 12 33374484 to 33374488 4 + TSS region transcription start site region 113197
Tssr113198 12 33394815 to 33394824 9 + TSS region transcription start site region 113198
Efcab10 12 33394854 to 33401267 6413 + protein coding gene EF-hand calcium binding domain 10
Tssr113199 12 33394858 to 33394868 10 + TSS region transcription start site region 113199
Cpgi4547 12 33395031 to 33395369 338 CpG island CpG island 4547
Tssr113200 12 33395050 to 33395090 40 + TSS region transcription start site region 113200
Gm47506 12 33401365 to 33404775 3410 - pseudogene predicted gene, 47506
Cpgi4548 12 33429436 to 33430166 730 CpG island CpG island 4548
Tssr113201 12 33429605 to 33429649 44 + TSS region transcription start site region 113201
Twistnb 12 33429624 to 33439380 9756 + protein coding gene twist basic helix-loop-helix transcription factor 1 neighbor
Tssr113202 12 33434103 to 33434110 7 + TSS region transcription start site region 113202
Gm23529 12 33452712 to 33452843 131 - snoRNA gene predicted gene, 23529
Gm9368 12 33496067 to 33496897 830 - pseudogene predicted gene 9368