Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:33209436-33650166

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atxn7l1 12 33147693 to 33373185 225492 + protein coding gene ataxin 7-like 1
Atxn7l1os1 12 33193994 to 33228854 34860 - antisense lncRNA gene ataxin 7-like 1, opposite strand 1
Tssr113181 12 33250123 to 33250154 31 + TSS region transcription start site region 113181
Gm38649 12 33252441 to 33259993 7552 - lncRNA gene predicted gene, 38649
Tssr3823 12 33279449 to 33279450 1 - TSS region transcription start site region 3823
Tssr116105 12 33284544 to 33284549 5 - TSS region transcription start site region 116105
Tssr113182 12 33302246 to 33302266 20 + TSS region transcription start site region 113182
Cpgi4546 12 33302867 to 33303113 246 CpG island CpG island 4546
Tssr113183 12 33313989 to 33314019 30 + TSS region transcription start site region 113183
Tssr113184 12 33314262 to 33314288 26 + TSS region transcription start site region 113184
Tssr113185 12 33314289 to 33314328 39 + TSS region transcription start site region 113185
Tssr113186 12 33314333 to 33314368 35 + TSS region transcription start site region 113186
Tssr113187 12 33314375 to 33314408 33 + TSS region transcription start site region 113187
Tssr116106 12 33315241 to 33315262 21 - TSS region transcription start site region 116106
Tssr113188 12 33315393 to 33315411 18 + TSS region transcription start site region 113188
Tssr113189 12 33315412 to 33315447 35 + TSS region transcription start site region 113189
Tssr113190 12 33315490 to 33315501 11 + TSS region transcription start site region 113190
Tssr113191 12 33315513 to 33315526 13 + TSS region transcription start site region 113191
Tssr116107 12 33316644 to 33316655 11 - TSS region transcription start site region 116107
4933422E07Rik 12 33329591 to 33330466 875 unclassified gene RIKEN cDNA 4933422E07 gene
Tssr113192 12 33333153 to 33333155 2 + TSS region transcription start site region 113192
Tssr113193 12 33333235 to 33333250 15 + TSS region transcription start site region 113193
Tssr113194 12 33337413 to 33337425 12 + TSS region transcription start site region 113194
Tssr113195 12 33337508 to 33337511 3 + TSS region transcription start site region 113195
Tssr113196 12 33348402 to 33348408 6 + TSS region transcription start site region 113196
Atxn7l1os2 12 33358243 to 33394760 36517 - antisense lncRNA gene ataxin 7-like 1, opposite strand 2
Tssr113197 12 33374484 to 33374488 4 + TSS region transcription start site region 113197
Tssr113198 12 33394815 to 33394824 9 + TSS region transcription start site region 113198
Efcab10 12 33394854 to 33401267 6413 + protein coding gene EF-hand calcium binding domain 10
Tssr113199 12 33394858 to 33394868 10 + TSS region transcription start site region 113199
Cpgi4547 12 33395031 to 33395369 338 CpG island CpG island 4547
Tssr113200 12 33395050 to 33395090 40 + TSS region transcription start site region 113200
Gm47506 12 33401365 to 33404775 3410 - pseudogene predicted gene, 47506
Cpgi4548 12 33429436 to 33430166 730 CpG island CpG island 4548
Tssr113201 12 33429605 to 33429649 44 + TSS region transcription start site region 113201
Twistnb 12 33429624 to 33439380 9756 + protein coding gene twist basic helix-loop-helix transcription factor 1 neighbor
Tssr113202 12 33434103 to 33434110 7 + TSS region transcription start site region 113202
Gm23529 12 33452712 to 33452843 131 - snoRNA gene predicted gene, 23529
Gm9368 12 33496067 to 33496897 830 - pseudogene predicted gene 9368