Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:33061711-33197586

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdhr3 12 33033796 to 33092875 59079 - protein coding gene cadherin-related family member 3
Tssr116100 12 33061764 to 33061802 38 - TSS region transcription start site region 116100
Tssr116101 12 33061806 to 33061818 12 - TSS region transcription start site region 116101
Gm22904 12 33062441 to 33062600 159 + miRNA gene predicted gene, 22904
Tssr116102 12 33092883 to 33092902 19 - TSS region transcription start site region 116102
F730043M19Rik 12 33111711 to 33147586 35875 - bidirectional promoter lncRNA gene RIKEN cDNA F730043M19 gene
Gm16267 12 33111962 to 33138945 26983 + lincRNA gene predicted gene 16267
Cpgi4544 12 33146836 to 33148146 1310 CpG island CpG island 4544
Tssr113175 12 33146956 to 33146994 38 + TSS region transcription start site region 113175
Tssr113176 12 33146995 to 33147004 9 + TSS region transcription start site region 113176
Tssr116103 12 33147543 to 33147590 47 - TSS region transcription start site region 116103
Tssr116104 12 33147591 to 33147617 26 - TSS region transcription start site region 116104
Atxn7l1 12 33147693 to 33373185 225492 + protein coding gene ataxin 7-like 1
Tssr113177 12 33147700 to 33147716 16 + TSS region transcription start site region 113177
Tssr113178 12 33147755 to 33147770 15 + TSS region transcription start site region 113178
Tssr113179 12 33147771 to 33147820 49 + TSS region transcription start site region 113179
Cpgi4545 12 33175951 to 33176215 264 CpG island CpG island 4545
D12Mit146 12 33188578 to 33188729 151 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 146
Atxn7l1os1 12 33193994 to 33228854 34860 - antisense lncRNA gene ataxin 7-like 1, opposite strand 1