Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:32946806-33176818

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4933406C10Rik 12 32919384 to 32953789 34405 - lincRNA gene RIKEN cDNA 4933406C10 gene
Cpgi4543 12 32953484 to 32955047 1563 CpG island CpG island 4543
Tssr3821 12 32953717 to 32953725 8 - TSS region transcription start site region 3821
Tssr116099 12 32953772 to 32953846 74 - TSS region transcription start site region 116099
Tssr113168 12 32953855 to 32953870 15 + TSS region transcription start site region 113168
Sypl 12 32953873 to 32979502 25629 + protein coding gene synaptophysin-like protein
Tssr113169 12 32953874 to 32953891 17 + TSS region transcription start site region 113169
Tssr113170 12 32953914 to 32953936 22 + TSS region transcription start site region 113170
Tssr113171 12 32954179 to 32954278 99 + TSS region transcription start site region 113171
Tssr113172 12 32954280 to 32954292 12 + TSS region transcription start site region 113172
Tssr113173 12 32954300 to 32954306 6 + TSS region transcription start site region 113173
Tssr113174 12 32954559 to 32954573 14 + TSS region transcription start site region 113174
Tssr3822 12 32995731 to 32995783 52 + TSS region transcription start site region 3822
Gm40874 12 32996038 to 33042444 46406 + lncRNA gene predicted gene, 40874
Gm24922 12 32999909 to 33000010 101 - snRNA gene predicted gene, 24922
Cdhr3 12 33033796 to 33092875 59079 - protein coding gene cadherin-related family member 3
Tssr116100 12 33061764 to 33061802 38 - TSS region transcription start site region 116100
Tssr116101 12 33061806 to 33061818 12 - TSS region transcription start site region 116101
Gm22904 12 33062441 to 33062600 159 + miRNA gene predicted gene, 22904
Tssr116102 12 33092883 to 33092902 19 - TSS region transcription start site region 116102
F730043M19Rik 12 33111711 to 33147586 35875 - bidirectional promoter lncRNA gene RIKEN cDNA F730043M19 gene
Gm16267 12 33111962 to 33138945 26983 + lincRNA gene predicted gene 16267
Cpgi4544 12 33146836 to 33148146 1310 CpG island CpG island 4544
Tssr113175 12 33146956 to 33146994 38 + TSS region transcription start site region 113175
Tssr113176 12 33146995 to 33147004 9 + TSS region transcription start site region 113176
Tssr116103 12 33147543 to 33147590 47 - TSS region transcription start site region 116103
Tssr116104 12 33147591 to 33147617 26 - TSS region transcription start site region 116104
Atxn7l1 12 33147693 to 33373185 225492 + protein coding gene ataxin 7-like 1
Tssr113177 12 33147700 to 33147716 16 + TSS region transcription start site region 113177
Tssr113178 12 33147755 to 33147770 15 + TSS region transcription start site region 113178
Tssr113179 12 33147771 to 33147820 49 + TSS region transcription start site region 113179
Cpgi4545 12 33175951 to 33176215 264 CpG island CpG island 4545