Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:32823484-33085047

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nampt 12 32820335 to 32853369 33034 + protein coding gene nicotinamide phosphoribosyltransferase
Gdap10 12 32824116 to 32826919 2803 + lincRNA gene ganglioside-induced differentiation-associated-protein 10
Tssr113150 12 32830139 to 32830150 11 + TSS region transcription start site region 113150
Tssr113151 12 32830260 to 32830282 22 + TSS region transcription start site region 113151
Tssr113152 12 32831997 to 32832014 17 + TSS region transcription start site region 113152
Tssr113153 12 32834353 to 32834392 39 + TSS region transcription start site region 113153
Tssr113154 12 32835391 to 32835394 3 + TSS region transcription start site region 113154
Tssr113155 12 32839235 to 32839247 12 + TSS region transcription start site region 113155
Tssr113156 12 32840936 to 32840949 13 + TSS region transcription start site region 113156
Tssr113157 12 32841051 to 32841063 12 + TSS region transcription start site region 113157
Tssr113158 12 32848611 to 32848626 15 + TSS region transcription start site region 113158
Tssr113159 12 32848666 to 32848685 19 + TSS region transcription start site region 113159
Tssr113160 12 32850509 to 32850576 67 + TSS region transcription start site region 113160
Tssr113161 12 32850579 to 32850608 29 + TSS region transcription start site region 113161
Tssr113162 12 32850632 to 32850656 24 + TSS region transcription start site region 113162
Tssr113163 12 32850673 to 32850691 18 + TSS region transcription start site region 113163
Tssr113164 12 32850704 to 32850728 24 + TSS region transcription start site region 113164
Tssr113165 12 32850780 to 32850800 20 + TSS region transcription start site region 113165
Tssr113166 12 32851433 to 32851444 11 + TSS region transcription start site region 113166
Tssr116098 12 32851604 to 32851608 4 - TSS region transcription start site region 116098
Tssr113167 12 32859350 to 32859353 3 + TSS region transcription start site region 113167
Gm47948 12 32878305 to 32880411 2106 + lincRNA gene predicted gene, 47948
Gm33484 12 32888815 to 32909134 20319 - lncRNA gene predicted gene, 33484
Gm33441 12 32896391 to 32902386 5995 + lncRNA gene predicted gene, 33441
4933406C10Rik 12 32919384 to 32953789 34405 - lincRNA gene RIKEN cDNA 4933406C10 gene
Gm19056 12 32929151 to 32929947 796 - pseudogene predicted gene, 19056
Gm18622 12 32930155 to 32930715 560 + pseudogene predicted gene, 18622
Gm47961 12 32931480 to 32931732 252 - pseudogene predicted gene, 47961
Cpgi4543 12 32953484 to 32955047 1563 CpG island CpG island 4543
Tssr3821 12 32953717 to 32953725 8 - TSS region transcription start site region 3821
Tssr116099 12 32953772 to 32953846 74 - TSS region transcription start site region 116099
Tssr113168 12 32953855 to 32953870 15 + TSS region transcription start site region 113168
Sypl 12 32953873 to 32979502 25629 + protein coding gene synaptophysin-like protein
Tssr113169 12 32953874 to 32953891 17 + TSS region transcription start site region 113169
Tssr113170 12 32953914 to 32953936 22 + TSS region transcription start site region 113170
Tssr113171 12 32954179 to 32954278 99 + TSS region transcription start site region 113171
Tssr113172 12 32954280 to 32954292 12 + TSS region transcription start site region 113172
Tssr113173 12 32954300 to 32954306 6 + TSS region transcription start site region 113173
Tssr113174 12 32954559 to 32954573 14 + TSS region transcription start site region 113174
Tssr3822 12 32995731 to 32995783 52 + TSS region transcription start site region 3822
Gm40874 12 32996038 to 33042444 46406 + lncRNA gene predicted gene, 40874
Gm24922 12 32999909 to 33000010 101 - snRNA gene predicted gene, 24922
Cdhr3 12 33033796 to 33092875 59079 - protein coding gene cadherin-related family member 3
Tssr116100 12 33061764 to 33061802 38 - TSS region transcription start site region 116100
Tssr116101 12 33061806 to 33061818 12 - TSS region transcription start site region 116101
Gm22904 12 33062441 to 33062600 159 + miRNA gene predicted gene, 22904