Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:31708458-32008592

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cog5 12 31654869 to 31937630 282761 + protein coding gene component of oligomeric golgi complex 5
Gpr22 12 31706867 to 31713926 7059 - protein coding gene G protein-coupled receptor 22
Tssr116052 12 31713741 to 31713748 7 - TSS region transcription start site region 116052
Tssr116053 12 31713818 to 31713825 7 - TSS region transcription start site region 116053
Tssr116054 12 31713837 to 31713848 11 - TSS region transcription start site region 116054
Tssr116055 12 31713860 to 31713871 11 - TSS region transcription start site region 116055
Tssr116056 12 31713873 to 31713898 25 - TSS region transcription start site region 116056
Tssr113122 12 31735691 to 31735714 23 + TSS region transcription start site region 113122
Gm48808 12 31747325 to 31747672 347 + pseudogene predicted gene, 48808
Gm18029 12 31748072 to 31748780 708 + pseudogene predicted gene, 18029
Gm48809 12 31846523 to 31849626 3103 - antisense lncRNA gene predicted gene, 48809
Gm25913 12 31858458 to 31858592 134 + snoRNA gene predicted gene, 25913
Tssr113123 12 31870582 to 31870586 4 + TSS region transcription start site region 113123
Gm35666 12 31894497 to 31898825 4328 - pseudogene predicted gene, 35666
Hbp1 12 31926452 to 31950535 24083 - protein coding gene high mobility group box transcription factor 1
Tssr116057 12 31928797 to 31928801 4 - TSS region transcription start site region 116057
Tssr116058 12 31944530 to 31944531 1 - TSS region transcription start site region 116058
Tssr116059 12 31948769 to 31948774 5 - TSS region transcription start site region 116059
Cpgi4538 12 31949196 to 31950558 1362 CpG island CpG island 4538
Tssr113124 12 31949586 to 31949609 23 + TSS region transcription start site region 113124
Tssr116060 12 31950186 to 31950197 11 - TSS region transcription start site region 116060
Tssr116061 12 31950213 to 31950246 33 - TSS region transcription start site region 116061
Tssr116062 12 31950552 to 31950560 8 - TSS region transcription start site region 116062
Prkar2b 12 31958476 to 32061296 102820 - protein coding gene protein kinase, cAMP dependent regulatory, type II beta
Tssr116063 12 31996881 to 31996882 1 - TSS region transcription start site region 116063
Tssr116064 12 31996927 to 31996932 5 - TSS region transcription start site region 116064
Tssr116065 12 31996943 to 31996954 11 - TSS region transcription start site region 116065
Tssr116066 12 31996957 to 31996965 8 - TSS region transcription start site region 116066
Tssr116067 12 31996977 to 31996982 5 - TSS region transcription start site region 116067