Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:31369829-31614616

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit108 12 31380869 to 31381010 141 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 108
Tssr113114 12 31390810 to 31390823 13 + TSS region transcription start site region 113114
Tssr113115 12 31390843 to 31390850 7 + TSS region transcription start site region 113115
Tssr113116 12 31418726 to 31418732 6 + TSS region transcription start site region 113116
Gm9359 12 31418848 to 31420068 1220 + pseudogene predicted gene 9359
Slc26a3 12 31433142 to 31473922 40780 + protein coding gene solute carrier family 26, member 3
Tssr113117 12 31438209 to 31438227 18 + TSS region transcription start site region 113117
Tssr113118 12 31447006 to 31447009 3 + TSS region transcription start site region 113118
Tssr113119 12 31461696 to 31461704 8 + TSS region transcription start site region 113119
Cbll1 12 31484829 to 31499616 14787 - protein coding gene Casitas B-lineage lymphoma-like 1
Gm29542 12 31486958 to 31487889 931 + antisense lncRNA gene predicted gene 29542
Cpgi4533 12 31498939 to 31500341 1402 CpG island CpG island 4533
Tssr116042 12 31499541 to 31499563 22 - TSS region transcription start site region 116042
Gm40362 12 31499759 to 31512966 13207 + lncRNA gene predicted gene, 40362
Tssr116043 12 31499879 to 31499892 13 - TSS region transcription start site region 116043
Gm10473 12 31500067 to 31500746 679 unclassified gene predicted gene 10473
Gm29541 12 31500068 to 31500745 677 - lincRNA gene predicted gene 29541
Slc26a4 12 31519827 to 31559969 40142 - protein coding gene solute carrier family 26, member 4
Tssr3818 12 31536556 to 31536566 10 - TSS region transcription start site region 3818
D12Mit59 12 31542527 to 31542677 150 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 59
Cpgi4534 12 31558923 to 31560005 1082 CpG island CpG island 4534
Tssr116044 12 31559983 to 31559984 1 - TSS region transcription start site region 116044
Gm48524 12 31562866 to 31563225 359 + pseudogene predicted gene, 48524
Bcap29 12 31595354 to 31634658 39304 - protein coding gene B cell receptor associated protein 29