Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:29818738-30528884

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myt1l 12 29528384 to 29923213 394829 + protein coding gene myelin transcription factor 1-like
Cpgi4518 12 29840130 to 29840295 165 CpG island CpG island 4518
Tssr113081 12 29840207 to 29840250 43 + TSS region transcription start site region 113081
Gm46346 12 29911433 to 29913161 1728 - lncRNA gene predicted gene, 46346
Tssr116027 12 29915153 to 29915162 9 - TSS region transcription start site region 116027
Gm31939 12 29924988 to 29937951 12963 - lncRNA gene predicted gene, 31939
Cpgi4519 12 29937760 to 29939017 1257 CpG island CpG island 4519
Pxdn 12 29937956 to 30017658 79702 + protein coding gene peroxidasin
Tssr113082 12 29937976 to 29937987 11 + TSS region transcription start site region 113082
Tssr113083 12 29938006 to 29938021 15 + TSS region transcription start site region 113083
Tssr113084 12 29938042 to 29938059 17 + TSS region transcription start site region 113084
Tssr113085 12 29982142 to 29982153 11 + TSS region transcription start site region 113085
Cpgi4520 12 30002585 to 30002810 225 CpG island CpG island 4520
Tssr113086 12 30019638 to 30019641 3 + TSS region transcription start site region 113086
Tpo 12 30054659 to 30132624 77965 - protein coding gene thyroid peroxidase
Gm15691 12 30059657 to 30062113 2456 + antisense lncRNA gene predicted gene 15691
Cpgi4521 12 30103032 to 30103502 470 CpG island CpG island 4521
Gm40873 12 30133220 to 30135401 2181 - lncRNA gene predicted gene, 40873
Gm32084 12 30138447 to 30145820 7373 - lncRNA gene predicted gene, 32084
D12Mit136 12 30173738 to 30173884 146 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 136
Sntg2 12 30174482 to 30373375 198893 - protein coding gene syntrophin, gamma 2
Cpgi4522 12 30372993 to 30373613 620 CpG island CpG island 4522
Tssr116028 12 30373274 to 30373285 11 - TSS region transcription start site region 116028
Tssr116029 12 30373302 to 30373315 13 - TSS region transcription start site region 116029
Tssr116030 12 30373320 to 30373337 17 - TSS region transcription start site region 116030
Tssr116031 12 30373338 to 30373351 13 - TSS region transcription start site region 116031
Tssr116032 12 30373358 to 30373380 22 - TSS region transcription start site region 116032
2310016D03Rik 12 30410559 to 30467358 56799 - lincRNA gene RIKEN cDNA 2310016D03 gene
Gm25865 12 30457968 to 30458071 103 - miRNA gene predicted gene, 25865
Tssr116033 12 30467391 to 30467401 10 - TSS region transcription start site region 116033
Tssr113087 12 30479063 to 30479072 9 + TSS region transcription start site region 113087
Gm28806 12 30482822 to 30487052 4230 - lincRNA gene predicted gene 28806
Ryk-ps1 12 30486755 to 30486989 234 + pseudogene receptor-like tyrosine kinase, pseudogene 1