MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:28726798-28892494

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trappc12	12	28690628 to 28750472	59844	-	protein coding gene	trafficking protein particle complex 12
Gm31269	12	28740563 to 28745568	5005	+	lncRNA gene	predicted gene, 31269
Cpgi4514	12	28750076 to 28750548	472		CpG island	CpG island 4514
Tssr116020	12	28750365 to 28750418	53	-	TSS region	transcription start site region 116020
Tssr116021	12	28750425 to 28750474	49	-	TSS region	transcription start site region 116021
Cpgi4515	12	28751565 to 28752228	663		CpG island	CpG island 4515
Eipr1	12	28751798 to 28867494	115696	+	protein coding gene	EARP complex and GARP complex interacting protein 1
Tssr113052	12	28751798 to 28751868	70	+	TSS region	transcription start site region 113052
Gm46345	12	28769332 to 28777111	7779	+	protein coding gene	predicted gene, 46345
Tssr113053	12	28771497 to 28771503	6	+	TSS region	transcription start site region 113053
Gm48904	12	28789669 to 28792612	2943	+	unclassified gene	predicted gene, 48904
Tssr3815	12	28800697 to 28800709	12	+	TSS region	transcription start site region 3815
Tssr113054	12	28802221 to 28802225	4	+	TSS region	transcription start site region 113054
Tssr116022	12	28808691 to 28808712	21	-	TSS region	transcription start site region 116022
Gm48905	12	28810138 to 28811191	1053	+	sense intronic lncRNA gene	predicted gene, 48905
Tssr113055	12	28834701 to 28834714	13	+	TSS region	transcription start site region 113055
Gm48080	12	28886230 to 28886382	152	-	pseudogene	predicted gene, 48080
Tssr116023	12	28886413 to 28886415	2	-	TSS region	transcription start site region 116023