Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:28573372-28673394

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Allc 12 28553755 to 28582523 28768 - protein coding gene allantoicase
Tssr116005 12 28582517 to 28582533 16 - TSS region transcription start site region 116005
Tssr116006 12 28582538 to 28582559 21 - TSS region transcription start site region 116006
Colec11 12 28594173 to 28623377 29204 - protein coding gene collectin sub-family member 11
Cpgi4509 12 28594764 to 28595065 301 CpG island CpG island 4509
Tssr116007 12 28623282 to 28623296 14 - TSS region transcription start site region 116007
Tssr116008 12 28623313 to 28623329 16 - TSS region transcription start site region 116008
Tssr116009 12 28623335 to 28623346 11 - TSS region transcription start site region 116009
Tssr116010 12 28623350 to 28623371 21 - TSS region transcription start site region 116010
Tssr116011 12 28623372 to 28623394 22 - TSS region transcription start site region 116011
Tssr116012 12 28623401 to 28623414 13 - TSS region transcription start site region 116012
Tssr116013 12 28623456 to 28623463 7 - TSS region transcription start site region 116013
Rps7 12 28630854 to 28635953 5099 - protein coding gene ribosomal protein S7
Tssr116014 12 28635233 to 28635240 7 - TSS region transcription start site region 116014
Cpgi4510 12 28635265 to 28636216 951 CpG island CpG island 4510
Tssr116015 12 28635832 to 28635837 5 - TSS region transcription start site region 116015
Tssr116016 12 28635843 to 28635865 22 - TSS region transcription start site region 116016
Tssr116017 12 28635867 to 28635887 20 - TSS region transcription start site region 116017
Tssr116018 12 28635891 to 28635905 14 - TSS region transcription start site region 116018
Tssr116019 12 28635914 to 28635952 38 - TSS region transcription start site region 116019
Cpgi4511 12 28649321 to 28649957 636 CpG island CpG island 4511
Tssr113046 12 28649601 to 28649649 48 + TSS region transcription start site region 113046
Rnaseh1 12 28649602 to 28659589 9987 + protein coding gene ribonuclease H1
Tssr113047 12 28649652 to 28649670 18 + TSS region transcription start site region 113047
Tssr113048 12 28653899 to 28653903 4 + TSS region transcription start site region 113048