Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:27959759-28629409

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45941 12 27946042 to 27982234 36192 + lincRNA gene predicted gene, 45941
Gm31025 12 27995008 to 28010046 15038 + lincRNA gene predicted gene, 31025
Gm46326 12 28054041 to 28056040 1999 + lncRNA gene predicted gene, 46326
Gm25923 12 28060391 to 28060528 137 - rRNA gene predicted gene, 25923
Gm47872 12 28249759 to 28339409 89650 - lincRNA gene predicted gene, 47872
Gm47871 12 28320635 to 28321058 423 - lincRNA gene predicted gene, 47871
Gm25564 12 28350263 to 28350394 131 + snoRNA gene predicted gene, 25564
Dcdc2c 12 28437795 to 28552399 114604 - protein coding gene doublecortin domain containing 2C
Gm47878 12 28523050 to 28523356 306 + pseudogene predicted gene, 47878
D12Mit1004 12 28543916 to 28544031 115 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 1004
Cpgi4508 12 28551895 to 28552499 604 CpG island CpG island 4508
Tssr116004 12 28552393 to 28552404 11 - TSS region transcription start site region 116004
Allc 12 28553755 to 28582523 28768 - protein coding gene allantoicase
Tssr116005 12 28582517 to 28582533 16 - TSS region transcription start site region 116005
Tssr116006 12 28582538 to 28582559 21 - TSS region transcription start site region 116006
Colec11 12 28594173 to 28623377 29204 - protein coding gene collectin sub-family member 11
Cpgi4509 12 28594764 to 28595065 301 CpG island CpG island 4509
Tssr116007 12 28623282 to 28623296 14 - TSS region transcription start site region 116007
Tssr116008 12 28623313 to 28623329 16 - TSS region transcription start site region 116008
Tssr116009 12 28623335 to 28623346 11 - TSS region transcription start site region 116009
Tssr116010 12 28623350 to 28623371 21 - TSS region transcription start site region 116010
Tssr116011 12 28623372 to 28623394 22 - TSS region transcription start site region 116011
Tssr116012 12 28623401 to 28623414 13 - TSS region transcription start site region 116012
Tssr116013 12 28623456 to 28623463 7 - TSS region transcription start site region 116013